RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PPP3CAQ08209 521 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 PNOCQ13519 176 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 BECN1Q14457 450 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 ITPRIPL2Q3MIP1 535 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 ZNF667Q5HYK9 610 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 TRIM68Q6AZZ1 485 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 DENND5BQ6ZUT9 1274 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 SMYD4Q8IYR2 804 aaPredicted RBP17.87■□□□□ 0.45
DDB1-215ENST00000539712 ZBTB44Q8NCP5 570 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 THG1LQ9NWX6 298 aaKnown RBP17.87■□□□□ 0.45
DDB1-215ENST00000539712 FRMD4BQ9Y2L6 1034 aa17.87■□□□□ 0.45
DDB1-215ENST00000539712 ZNF638Q14966 1978 aaKnown RBP17.86■□□□□ 0.45
DDB1-215ENST00000539712 ZNF840PA6NDX5 716 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 ARSAP15289 507 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 ASPAP45381 313 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 VAMP7P51809 220 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 NUCB2P80303 420 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 FAM160A1Q05DH4 1040 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 CCINQ13939 588 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 ZNF77Q15935 545 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 SPOPLQ6IQ16 392 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 C1orf228Q6PIY5 440 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 SCARA5Q6ZMJ2 495 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 ADSSL1Q8N142 457 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 ARL14EPQ8N8R7 260 aaPredicted RBP17.86■□□□□ 0.45
DDB1-215ENST00000539712 SUMF1Q8NBK3 374 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 SPATA20Q8TB22 786 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 CCDC47Q96A33 483 aaKnown RBP17.86■□□□□ 0.45
DDB1-215ENST00000539712 EBF3Q9H4W6 596 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 KIF9Q9HAQ2 790 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 C2orf42Q9NWW7 574 aa17.86■□□□□ 0.45
DDB1-215ENST00000539712 TRAV19A0A0A6YYK7 116 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 TRIM66O15016 1216 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 LILRB5O75023 590 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 KIF20AO95235 890 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 HLA-DRAP01903 254 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 LMNAP02545 664 aaKnown RBP17.85■□□□□ 0.45
DDB1-215ENST00000539712 TRIM49P0CI25 452 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 TRIM49CP0CI26 452 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 ENPEPQ07075 957 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 RUNX3Q13761 415 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 PON2Q15165 354 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 Q6ZS52 159 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 TAS1R2Q8TE23 839 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 TAF4BQ92750 862 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 KCNK16Q96T55 309 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 ELOVL4Q9GZR5 314 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 RNF38Q9H0F5 515 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
DDB1-215ENST00000539712 HMGXB4Q9UGU5 601 aa17.85■□□□□ 0.45
DDB1-215ENST00000539712 TNFRSF10BO14763 440 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 USP17L7P0C7H9 530 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 HDCP19113 662 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 GCLMP48507 274 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 USP4Q13107 963 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 ADAM9Q13443 819 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 MTF1Q14872 753 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 INTS8Q75QN2 995 aaKnown RBP17.84■□□□□ 0.45
DDB1-215ENST00000539712 FAM186BQ8IYM0 893 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 CRYBG2Q8N1P7 616 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 EEF2KMTQ96G04 330 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 IER2Q9BTL4 223 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
DDB1-215ENST00000539712 ZSCAN32Q9NX65 697 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 IL37Q9NZH6 218 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 ARHGAP26Q9UNA1 814 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 PCDHGA2Q9Y5H1 932 aa17.84■□□□□ 0.45
DDB1-215ENST00000539712 OLFM2O95897 454 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 CKMP06732 381 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 TCF3P15923 654 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 ANXA13P27216 316 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 HOXC13P31276 330 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 PSMC2P35998 433 aaKnown RBP17.83■□□□□ 0.44
DDB1-215ENST00000539712 PRCPP42785 496 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 NDST1P52848 882 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 SATB1Q01826 763 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 TAF10Q12962 218 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 ORC1Q13415 861 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 EDRF1Q3B7T1 1238 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 TMEM196Q5HYL7 178 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 NAIF1Q69YI7 327 aaPredicted RBP17.83■□□□□ 0.44
DDB1-215ENST00000539712 ZC3H14Q6PJT7 736 aaKnown RBP17.83■□□□□ 0.44
DDB1-215ENST00000539712 ACOT1Q86TX2 421 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 FAM35AQ86V20 835 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 SPEM1Q8N4L4 309 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 ZMIZ2Q8NF64 920 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 SH3RF2Q8TEC5 729 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.44
DDB1-215ENST00000539712 LINC00597Q9H2U6 94 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDB1-215ENST00000539712 TRPM5Q9NZQ8 1165 aa17.83■□□□□ 0.44
DDB1-215ENST00000539712 DNAH14Q0VDD8 3507 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 TRDMT1O14717 391 aaKnown RBP17.82■□□□□ 0.44
DDB1-215ENST00000539712 BEST1O76090 585 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 OAS1P00973 400 aaKnown RBP17.82■□□□□ 0.44
DDB1-215ENST00000539712 PFKLP17858 780 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 RPL13P26373 211 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms