RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 HHATQ5VTY9 493 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 SCYL2Q6P3W7 929 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PRPF39Q86UA1 669 aaKnown RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 APOBEC3FQ8IUX4 373 aaKnown RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 RFWD2Q8NHY2 731 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 TCP10LQ8TDR4 215 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 GPRC5DQ9NZD1 345 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 MCM8Q9UJA3 840 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 STAG3L1P0CL83 205 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ATXN1P54253 815 aaKnown RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 CDH6P55285 790 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 IRX3P78415 501 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 SPARCL1Q14515 664 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 AMHR2Q16671 573 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 VSIG1Q86XK7 387 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 RIOX2Q8IUF8 465 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 LRRC8CQ8TDW0 803 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 RPF1Q9H9Y2 349 aaKnown RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PSMC3IPQ9P2W1 217 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 USP18Q9UMW8 372 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PCDHGC3Q9UN70 934 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 DRG1Q9Y295 367 aaKnown RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ANK1P16157 1881 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 E5RJQ4 531 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PPEF2O14830 753 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ZNF286BP0CG31 522 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PROZP22891 400 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ELK3P41970 407 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 MSH2P43246 934 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 BAG6P46379 1132 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 EFNA5P52803 228 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 PTPN11Q06124 597 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 TMEM62Q0P6H9 643 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 MOGSQ13724 837 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 CA9Q16790 459 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 WLSQ5T9L3 541 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 LRRC38Q5VT99 294 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 DRICH1Q6PGQ1 229 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ASRGL1Q7L266 308 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 LRRC6Q86X45 466 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 FAM49BQ9NUQ9 324 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
UBE3B-210ENST00000539599 ACKR2O00590 384 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 CDH5P33151 784 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 GEMIN4P57678 1058 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 YWHAEP62258 255 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 CELF3Q5SZQ8 465 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 TSHZ1Q6ZSZ6 1077 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 PALM2Q8IXS6 379 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 PPIL6Q8IXY8 311 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 ZNF75CPQ92670 426 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 SERAC1Q96JX3 654 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 ADPGKQ9BRR6 497 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 B3GNT5Q9BYG0 378 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 IFT122Q9HBG6 1241 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 ARHGEF3Q9NR81 526 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 NKX1-2Q9UD57 310 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 SHOC2Q9UQ13 582 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 KBTBD13C9JR72 458 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 UGT1A9O60656 530 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 ANP32DO95626 131 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 TOP3BO95985 862 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 ZNF268Q14587 947 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 OR6B2Q6IFH4 312 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 DARS2Q6PI48 645 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 BBS12Q6ZW61 710 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 CYP4V2Q6ZWL3 525 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 NCAPGQ9BPX3 1015 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 UGT1A7Q9HAW7 530 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 UGT1A10Q9HAW8 530 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 UGT1A8Q9HAW9 530 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 PIH1D1Q9NWS0 290 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 DDX56Q9NY93 547 aaKnown RBP14.72□□□□□ -0.05
UBE3B-210ENST00000539599 TRIP11Q15643 1979 aa14.72□□□□□ -0.05
UBE3B-210ENST00000539599 EDF1O60869 148 aaKnown RBP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 DIAPH2O60879 1101 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 TRUB2O95900 331 aaKnown RBP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 TXNP10599 105 aaKnown RBP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 ERFP50548 548 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 NDST1P52848 882 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 GSCP56915 257 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 YWHAGP61981 247 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 PDK4Q16654 411 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 KBTBD12Q3ZCT8 623 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 EFHC2Q5JST6 749 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 FAM183BPQ6ZVS7 135 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 NSMCE1Q8WV22 266 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 DCAKDQ8WVC6 231 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 RXFP2Q8WXD0 754 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 FZD8Q9H461 694 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 ZNF395Q9H8N7 513 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-210ENST00000539599 KANSL3Q9P2N6 904 aa14.71□□□□□ -0.05
UBE3B-210ENST00000539599 UNC5CO95185 931 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 T-ENOLP0DO92 83 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 EPHB2P29323 1055 aa14.71□□□□□ -0.06
UBE3B-210ENST00000539599 GPD2P43304 727 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms