RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 BRD8Q9H0E9 1235 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ZCCHC17Q9NP64 241 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TUBGCP4Q9UGJ1 667 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CRLS1Q9UJA2 301 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 DTNAQ9Y4J8 743 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 KIF1AQ12756 1690 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 HEATR9A2RTY3 570 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 FKBP9O95302 570 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TGFB3P10600 412 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 GZMAP12544 262 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 MLNP12872 115 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ACTN3Q08043 901 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CDH18Q13634 790 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PDIA6Q15084 440 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 NLRP9Q7RTR0 991 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CLEC10AQ8IUN9 316 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CYGBQ8WWM9 190 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 THAP11Q96EK4 314 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM169Q96HH4 297 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PLEKHA8Q96JA3 519 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ADGRE3Q9BY15 652 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CYB561D2O14569 222 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 NCAM2O15394 837 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TFRCP02786 760 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 THP07101 528 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 THPOP40225 353 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CSTF3Q12996 717 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PREPLQ4J6C6 727 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 THAP2Q9H0W7 228 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 RRN3Q9NYV6 651 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TMX2Q9Y320 296 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ZMYM2Q9UBW7 1377 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SDR42E2A6NKP2 422 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SGPL1O95470 568 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PGK2P07205 417 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 VCLP18206 1134 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 BFSP2Q13515 415 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 FAM83AQ86UY5 434 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 OOSP2Q86WS3 158 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SH2D3CQ8N5H7 860 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 RFWD2Q8NHY2 731 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 UCMAQ8WVF2 138 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CGRRF1Q99675 332 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CELF4Q9BZC1 486 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SPASTQ9UBP0 616 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 USP18Q9UMW8 372 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 RUVBL2Q9Y230 463 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SOAT1P35610 550 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CYTH1Q15438 398 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 USP49Q70CQ1 688 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PLEKHH3Q7Z736 793 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 C4orf19Q8IY42 314 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ADGRF2Q8IZF7 708 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 EXD1Q8NHP7 514 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CNPY3Q9BT09 278 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ATP11BQ9Y2G3 1177 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SPACA6W5XKT8 324 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ANKRD26Q9UPS8 1709 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 KANSL1LA0AUZ9 987 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ALDH1A2O94788 518 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CNTN1Q12860 1018 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PCSK9Q8NBP7 692 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ENGASEQ8NFI3 743 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 DIS3LQ8TF46 1054 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 KCNB2Q92953 911 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 FBXO32Q969P5 355 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 IL17RAQ96F46 866 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 MAGEB18Q96M61 343 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ZSWIM1Q9BR11 485 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 MTMR12Q9C0I1 747 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PABPC3Q9H361 631 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 STN1Q9H668 368 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 WWOXQ9NZC7 414 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 DEPDC5O75140 1603 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 STX7O15400 261 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 MAP3K13O43283 966 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 B3GAT3O94766 335 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SEC24DO94855 1032 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CRTAMO95727 393 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 FDPSP14324 419 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 PSMA3P25788 255 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 HSD17B3P37058 310 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 GIT2Q14161 759 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CACHD1Q5VU97 1274 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 KHDRBS2Q5VWX1 349 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CAPRIN2Q6IMN6 1127 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 GJB7Q6PEY0 223 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 TRIM48Q8IWZ4 208 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 C1orf131Q8NDD1 294 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ANKRD7Q92527 254 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF229Q9UJW7 825 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 B2RBV5 119 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 KCNJ1P48048 391 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms