RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-213	ENST00000539357	TOE1	Q96GM8	510 aa	Known RBP	13.31	□□□□□ -0.28
POLE-213	ENST00000539357	ZBTB45	Q96K62	511 aa	Predicted RBP	13.31	□□□□□ -0.28
POLE-213	ENST00000539357	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.31	□□□□□ -0.28
POLE-213	ENST00000539357	NUMA1	Q14980	2115 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	USP17L7	P0C7H9	530 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	HAPLN1	P10915	354 aa	Predicted RBP	13.3	□□□□□ -0.28
POLE-213	ENST00000539357	CPA1	P15085	419 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	POU3F2	P20265	443 aa	Predicted RBP	13.3	□□□□□ -0.28
POLE-213	ENST00000539357	DDX6	P26196	483 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
POLE-213	ENST00000539357	ATP2C1	P98194	919 aa	Predicted RBP	13.3	□□□□□ -0.28
POLE-213	ENST00000539357	SUZ12	Q15022	739 aa	Known RBP	13.3	□□□□□ -0.28
POLE-213	ENST00000539357	DDR2	Q16832	855 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	ZNF568	Q3ZCX4	644 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	KCNT1	Q5JUK3	1230 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	EGFLAM	Q63HQ2	1017 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	CREB3L3	Q68CJ9	461 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	RUFY2	Q8WXA3	655 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	C2orf40	Q9H1Z8	148 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	ANKEF1	Q9NU02	776 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	TMLHE	Q9NVH6	421 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	CNTN3	Q9P232	1028 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	PCDHGB2	Q9Y5G2	931 aa		13.3	□□□□□ -0.28
POLE-213	ENST00000539357	ITPR3	Q14573	2671 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	SCN1A	P35498	2009 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	LRRK2	Q5S007	2527 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	TRAV19	A0A0A6YYK7	116 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	BLACE	A4D250	179 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	TBC1D3B	A6NDS4	549 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	WASH3P	C4AMC7	463 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357		H0Y8X5	98 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	ENC1	O14682	589 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	DTNB	O60941	627 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	GRK6	P43250	576 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	VAC14	Q08AM6	782 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	HDAC1	Q13547	482 aa	Predicted RBP	13.29	□□□□□ -0.28
POLE-213	ENST00000539357	MYBPC2	Q14324	1141 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	SLC10A6	Q3KNW5	377 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	RHBDF2	Q6PJF5	856 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	KDM7A	Q6ZMT4	941 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	ATG14	Q6ZNE5	492 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	ADGRG2	Q8IZP9	1017 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	ZNF248	Q8NDW4	579 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	CCDC148	Q8NFR7	591 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	IPO4	Q8TEX9	1081 aa	Known RBP	13.29	□□□□□ -0.28
POLE-213	ENST00000539357	DNASE2B	Q8WZ79	361 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	SNX19	Q92543	992 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	FOXJ1	Q92949	421 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	MAN2B2	Q9Y2E5	1009 aa		13.29	□□□□□ -0.28
POLE-213	ENST00000539357	USP9Y	O00507	2555 aa	Predicted RBP	13.29	□□□□□ -0.28
POLE-213	ENST00000539357	C2CD3	Q4AC94	2353 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	KCNJ18	B7U540	433 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	LEFTY2	O00292	366 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	CCNT1	O60563	726 aa	Known RBP	13.28	□□□□□ -0.28
POLE-213	ENST00000539357	ZNF217	O75362	1048 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	RFPL3	O75679	317 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	EXOSC10	Q01780	885 aa	Known RBP	13.28	□□□□□ -0.28
POLE-213	ENST00000539357	AKAP17A	Q02040	695 aa	Known RBP	13.28	□□□□□ -0.28
POLE-213	ENST00000539357	C10orf76	Q5T2E6	689 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	CACUL1	Q86Y37	369 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	PHTF2	Q8N3S3	785 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	FAM20A	Q96MK3	541 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	AIFM3	Q96NN9	605 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	ACO2	Q99798	780 aa	Known RBP	13.28	□□□□□ -0.28
POLE-213	ENST00000539357	TARS2	Q9BW92	718 aa	Known RBP	13.28	□□□□□ -0.28
POLE-213	ENST00000539357	ZCWPW1	Q9H0M4	648 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	WDR70	Q9NW82	654 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	SMPD4	Q9NXE4	827 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	GCNT4	Q9P109	453 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	PCDHA4	Q9UN74	947 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357	PCDHB1	Q9Y5F3	818 aa		13.28	□□□□□ -0.28
POLE-213	ENST00000539357		M0R2N6	131 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	IGHD	P01880	384 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	MPO	P05164	745 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	HDC	P19113	662 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	CD6	P30203	668 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	GRIA2	P42262	883 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	TNFRSF4	P43489	277 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	IGFBP7	Q16270	282 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	FBXL19	Q6PCT2	694 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	IL27RA	Q6UWB1	636 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	BLID	Q8IZY5	108 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	CNDP2	Q96KP4	475 aa	Known RBP	13.27	□□□□□ -0.29
POLE-213	ENST00000539357	MRGPRX1	Q96LB2	322 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	SENP8	Q96LD8	212 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	NACC1	Q96RE7	527 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	HSD17B14	Q9BPX1	270 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	TCHP	Q9BT92	498 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	LSG1	Q9H089	658 aa	Known RBP	13.27	□□□□□ -0.29
POLE-213	ENST00000539357	CD248	Q9HCU0	757 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	TNFSF13B	Q9Y275	285 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	STK36	Q9NRP7	1315 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	ICE1	Q9Y2F5	2266 aa		13.27	□□□□□ -0.29
POLE-213	ENST00000539357	ITPR2	Q14571	2701 aa		13.26	□□□□□ -0.29
POLE-213	ENST00000539357	SUV39H1	O43463	412 aa		13.26	□□□□□ -0.29
POLE-213	ENST00000539357	PRPF40A	O75400	957 aa	Known RBP	13.26	□□□□□ -0.29
POLE-213	ENST00000539357	LDOC1	O95751	146 aa	Predicted RBP	13.26	□□□□□ -0.29
POLE-213	ENST00000539357	CXCL8	P10145	99 aa		13.26	□□□□□ -0.29
POLE-213	ENST00000539357	GLDC	P23378	1020 aa		13.26	□□□□□ -0.29
POLE-213	ENST00000539357	NTSR1	P30989	418 aa		13.26	□□□□□ -0.29
POLE-213	ENST00000539357	PCBP4	P57723	403 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms