RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 MICAL2O94851 1124 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PROSCO94903 275 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 ACRP10323 421 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CD19P15391 556 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 RDXP35241 583 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 SLC1A1P43005 524 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 GPD2P43304 727 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 LIG3P49916 1009 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 GATMP50440 423 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CLCNKBP51801 687 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 LILRA4P59901 499 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 GNGT1P63211 74 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TAP1Q03518 808 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 FPGSQ05932 587 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 MESDQ14696 234 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 UPP1Q16831 310 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PTPN20Q4JDL3 420 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CCDC181Q5TID7 509 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 EMC10Q5UCC4 262 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 ARHGAP17Q68EM7 881 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 C16orf59Q7L2K0 433 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 DPH6Q7L8W6 267 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CRYBG2Q8N1P7 616 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 BADQ92934 168 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CAVIN3Q969G5 261 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 MS4A14Q96JA4 679 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.922e-13■■■■□ 19.5
DDB1-213ENST00000539332 PAAF1Q9BRP4 392 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TRIM7Q9C029 511 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PARVAQ9NVD7 372 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TBC1D13Q9NVG8 400 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 SMARCAL1Q9NZC9 954 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 STRIP2Q9ULQ0 834 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 COL4A4P53420 1690 aaPredicted RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 COL4A6Q14031 1691 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 FAM170AA1A519 330 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 TMEM191CA6NGB0 347 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 CCDC85CA6NKD9 419 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 AGPSO00116 658 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 PODXLO00592 558 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 CHUKO15111 745 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 EFCAB14O75071 495 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 BAIAP3O94812 1187 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 DDHD2O94830 711 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 SETSIPP0DME0 302 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 IGFBP6P24592 240 aaPredicted RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 PSEN1P49768 467 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 RNASELQ05823 741 aaKnown RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 DSC1Q08554 894 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 C2orf54Q08AI8 447 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 PPIGQ13427 754 aaKnown RBP eCLIP9.31□□□□□ -0.927e-11■□□□□ 9
DDB1-213ENST00000539332 TAX1BP1Q86VP1 789 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 ERICH1Q86X53 443 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 ZNF280BQ86YH2 543 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 UBL4BQ8N7F7 174 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 NIPA2Q8N8Q9 360 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 FEZF2Q8TBJ5 459 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 SPATA18Q8TC71 538 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 KRT35Q92764 455 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 BTBD6Q96KE9 485 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 CASD1Q96PB1 797 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 CPXM1Q96SM3 734 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
DDB1-213ENST00000539332 WDR35Q9P2L0 1181 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 PCDHA3Q9Y5H8 950 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 LAMA3Q16787 3333 aa9.31□□□□□ -0.92
DDB1-213ENST00000539332 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 H0YHG0 523 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 M0QYV0 167 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 MYO1FO00160 1098 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 NDUFAB1O14561 156 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 GABRDO14764 452 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 CEP104O60308 925 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 UPP2O95045 317 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 AMHP03971 560 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 SYN1P17600 705 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 PAX3P23760 479 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 MARCKSL1P49006 195 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 RPL34P49207 117 aaKnown RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 DEFB103AP81534 67 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 ZNF252P-AS1Q0IIN9 211 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 ORC1Q13415 861 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 ZNF268Q14587 947 aaPredicted RBP9.3□□□□□ -0.92
DDB1-213ENST00000539332 CLUL1Q15846 466 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 PTPROQ16827 1216 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 C2CD6Q53TS8 623 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 OTOP2Q7RTS6 562 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 XYLT1Q86Y38 959 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 CPNE8Q86YQ8 564 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 GIMAP7Q8NHV1 300 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 FNIP1Q8TF40 1166 aa9.3□□□□□ -0.92
DDB1-213ENST00000539332 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms