RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CAPN8A6NHC0 703 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
YBX3-207ENST00000539204 NDUFS2O75306 463 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 CYP17A1P05093 508 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 ADRB2P07550 413 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 NFICP08651 508 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 GABRG2P18507 467 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 RESTQ13127 1097 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 DHCR24Q15392 516 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
YBX3-207ENST00000539204 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
YBX3-207ENST00000539204 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 RINT1Q6NUQ1 792 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 LRRC69Q6ZNQ3 347 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 TRMT11Q7Z4G4 463 aaKnown RBP12.95□□□□□ -0.34
YBX3-207ENST00000539204 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 DIS3L2Q8IYB7 885 aaKnown RBP12.95□□□□□ -0.34
YBX3-207ENST00000539204 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 FOXJ1Q92949 421 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 BICD1Q96G01 975 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 CDC6Q99741 560 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 PRORYQ9H606 182 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 TMLHEQ9NVH6 421 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 CFAP46Q8IYW2 2715 aa12.95□□□□□ -0.34
YBX3-207ENST00000539204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 E9PMD0 336 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 LEFTY2O00292 366 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 PFKFB2O60825 505 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 ATXN1LP0C7T5 689 aaKnown RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 CYP2F1P24903 491 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 ITPKBP27987 946 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 TAF6P49848 677 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 GRIK2Q13002 908 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 MAPK7Q13164 816 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 ZNF174Q15697 407 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 RHBDF2Q6PJF5 856 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
YBX3-207ENST00000539204 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 RHBDD1Q8TEB9 315 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 TM6SF1Q9BZW5 370 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 PRDM16Q9HAZ2 1276 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 CYP8B1Q9UNU6 501 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 PTPRBP23467 1997 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
YBX3-207ENST00000539204 GOLGA8CPA6NN73 597 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 E9PAM4 449 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 DKK1O94907 266 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 ADH1CP00326 375 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 ZNF883P0CG24 379 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 PLS3P13797 630 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
YBX3-207ENST00000539204 PFKLP17858 780 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 MAOBP27338 520 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 ZXDBP98169 803 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 TRIM29Q14134 588 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 PDIA5Q14554 519 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 PREPLQ4J6C6 727 aaPredicted RBP12.93□□□□□ -0.34
YBX3-207ENST00000539204 RUSC1Q9BVN2 902 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 ABCB6Q9NP58 842 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 TM7SF3Q9NS93 570 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 DERAQ9Y315 318 aa12.93□□□□□ -0.34
YBX3-207ENST00000539204 MYO18BQ8IUG5 2567 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 A0A1B0GTW7 788 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 FAM149AA5PLN7 773 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 KPNA7A9QM74 516 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 OGTO15294 1046 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 REC8O95072 547 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 HLA-EP13747 358 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 HOXB2P14652 356 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 LIG4P49917 911 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
YBX3-207ENST00000539204 CFHR1Q03591 330 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 KDSRQ06136 332 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 ORC2Q13416 577 aaPredicted RBP12.92□□□□□ -0.34
YBX3-207ENST00000539204 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
YBX3-207ENST00000539204 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 IL27RAQ6UWB1 636 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 DBX2Q6ZNG2 339 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 C12orf40Q86WS4 652 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
YBX3-207ENST00000539204 BAHD1Q8TBE0 780 aaPredicted RBP12.92□□□□□ -0.34
YBX3-207ENST00000539204 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms