RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 DENND5BQ6ZUT9 1274 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
GGA3-202ENST00000538886 TRPM5Q9NZQ8 1165 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 HMGXB4Q9UGU5 601 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 RASAL2Q9UJF2 1139 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
GGA3-202ENST00000538886 A0A1W2PRU2 124 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 B4GALT3O60512 393 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 USP17L7P0C7H9 530 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ATICP31939 592 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 GPR15P49685 360 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 PPARDQ03181 441 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 PHLDB3Q6NSJ2 640 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 CCDC149Q6ZUS6 474 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 NYAP1Q6ZVC0 841 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 BAG1Q99933 345 aaPredicted RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 SH3GL3Q99963 347 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 HAUS4Q9H6D7 363 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 KIF9Q9HAQ2 790 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 HCFC2Q9Y5Z7 792 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ADAM12O43184 909 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 TKTL1P51854 596 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 TFF2Q03403 129 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 KLHDC7AQ5VTJ3 777 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 SLC39A11Q8N1S5 342 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 SPATA20Q8TB22 786 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 SPPL3Q8TCT6 385 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 BCAS4Q8TDM0 211 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 PPP1R10Q96QC0 940 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 PCSK1NQ9UHG2 260 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 SIX4Q9UIU6 781 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ATMINO43313 823 aaPredicted RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 BUB1O43683 1085 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ZRANB2O95218 330 aaKnown RBP eCLIP9.24□□□□□ -0.93
GGA3-202ENST00000538886 ASS1P00966 412 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 C4BPAP04003 597 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 FERP16591 822 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 EIF4A3P38919 411 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 PLCB3Q01970 1234 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ARHGAP15Q53QZ3 475 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 RWDD4Q6NW29 188 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 C1orf228Q6PIY5 440 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 RNF19BQ6ZMZ0 732 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 ZNF598Q86UK7 904 aaKnown RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 SLC9A9Q8IVB4 645 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 LRRC52Q8N7C0 313 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 PCED1BQ96HM7 432 aa9.24□□□□□ -0.93
GGA3-202ENST00000538886 CDX2Q99626 313 aaPredicted RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 SUDS3Q9H7L9 328 aaPredicted RBP9.24□□□□□ -0.93
GGA3-202ENST00000538886 PIGRP01833 764 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 IGHA2P01877 340 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 KCNE1P15382 129 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 ADIGQ0VDE8 80 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 MYBPC2Q14324 1141 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 ANO4Q32M45 955 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 PPP1R26Q5T8A7 1209 aaPredicted RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 SND1Q7KZF4 910 aaKnown RBP eCLIP9.23□□□□□ -0.93
GGA3-202ENST00000538886 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 MRPL10Q7Z7H8 261 aaKnown RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 SPDL1Q96EA4 605 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 MFSD1Q9H3U5 465 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 APOBEC3GQ9HC16 384 aaKnown RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 STRIP2Q9ULQ0 834 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 SRGAP2O75044 1071 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 HDCP19113 662 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 MESDQ14696 234 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 PABPC1LQ4VXU2 614 aaKnown RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 LRRC31Q6UY01 552 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 CACUL1Q86Y37 369 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 TMEM86AQ8N2M4 240 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 CEP112Q8N8E3 955 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.93
GGA3-202ENST00000538886 MYH11P35749 1972 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 MYO1FO00160 1098 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 RALAP11233 206 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 YWHAQP27348 245 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 CYP4F8P98187 520 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 KIF5AQ12840 1032 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 SCAMP5Q8TAC9 235 aa9.23□□□□□ -0.93
GGA3-202ENST00000538886 ACSF2Q96CM8 615 aaPredicted RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 SMG9Q9H0W8 520 aaKnown RBP9.23□□□□□ -0.93
GGA3-202ENST00000538886 SOX1O00570 391 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 NDUFAB1O14561 156 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 CHUKO15111 745 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 MDM4O15151 490 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ZSCAN12O43309 604 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 TGM5O43548 720 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 VNN1O95497 513 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 RB1P06400 928 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 MMEP08473 750 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms