RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 O00370 1275 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 THAP12O43422 761 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 KRT86O43790 486 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SEC24AO95486 1093 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 EPCAMP16422 314 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 GTF2F1P35269 517 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 26
CLN6-202ENST00000538696 CDR2Q01850 454 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SMARCB1Q12824 385 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 GOLGA7BQ2TAP0 167 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 C4orf50Q6ZRC1 276 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SPPL2BQ8TCT7 592 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 MYLIPQ8WY64 445 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLN6-202ENST00000538696 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 GAS2L1Q99501 681 aaPredicted RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 MED10Q9BTT4 135 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 KIAA1257Q9ULG3 409 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLN6-202ENST00000538696 PAXBP1Q9Y5B6 917 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ATP8B3O60423 1300 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 MYO16Q9Y6X6 1858 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 TUBB4AP04350 444 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 H2AFZP0C0S5 128 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 SPATA31D3P0C874 917 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 ATF2P15336 505 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 IGFBP4P22692 258 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 BDNFP23560 247 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 SSTR3P32745 418 aaPredicted RBP18.22■□□□□ 0.51
CLN6-202ENST00000538696 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 BPIFB4P59827 614 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 HYAL1Q12794 435 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 C10orf76Q5T2E6 689 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 SPATA31D4Q6ZUB0 917 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 H2AFVQ71UI9 128 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 TXLNBQ8N3L3 684 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 VN1R2Q8NFZ6 395 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 ZNF606Q8WXB4 792 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 CDCA3Q99618 268 aaPredicted RBP18.22■□□□□ 0.51
CLN6-202ENST00000538696 CDX2Q99626 313 aaPredicted RBP18.22■□□□□ 0.51
CLN6-202ENST00000538696 ABCB6Q9NP58 842 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 KRT82Q9NSB4 513 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 TMEM30AQ9NV96 361 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 HCFC2Q9Y5Z7 792 aa18.22■□□□□ 0.51
CLN6-202ENST00000538696 ZNF638Q14966 1978 aaKnown RBP18.21■□□□□ 0.51
CLN6-202ENST00000538696 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 MICAL2O94851 1124 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 C1RP00736 705 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 CFHP08603 1231 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 HAPLN1P10915 354 aaPredicted RBP18.21■□□□□ 0.51
CLN6-202ENST00000538696 CYP2F1P24903 491 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
CLN6-202ENST00000538696 DUSP4Q13115 394 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 KCNC3Q14003 757 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 CNGA2Q16280 664 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 LCLAT1Q6UWP7 414 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 TTC30AQ86WT1 665 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 KREMEN2Q8NCW0 462 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 SMARCD1Q96GM5 515 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 CYP4F11Q9HBI6 524 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 SALL4Q9UJQ4 1053 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 SLC27A5Q9Y2P5 690 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 YIPF1Q9Y548 306 aa18.21■□□□□ 0.51
CLN6-202ENST00000538696 MED7O43513 233 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 SOAT2O75908 522 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 MOCS3O95396 460 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 MAGEA11P43364 429 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 GPR15P49685 360 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 GALCP54803 685 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 STILQ15468 1287 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 DENND1BQ6P3S1 775 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 TCEAL8Q8IYN2 117 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 ZMIZ2Q8NF64 920 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 KIF18AQ8NI77 898 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
CLN6-202ENST00000538696 SEPT5Q99719 369 aaPredicted RBP18.2■□□□□ 0.5
CLN6-202ENST00000538696 SMOQ99835 787 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 IGFLR1Q9H665 355 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 MAN1C1Q9NR34 630 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 MTMR10Q9NXD2 777 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 HSFX1Q9UBD0 423 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 MAFFQ9ULX9 164 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 PCDHGC3Q9UN70 934 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 C2orf16Q68DN1 1984 aa18.2■□□□□ 0.5
CLN6-202ENST00000538696 M0QYV0 167 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 LINC01565O15544 149 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 AP1G2O75843 785 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 BEST1O76090 585 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 GLP2RO95838 553 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 FAM200BP0CF97 657 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 ELF1P32519 619 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 CLEC16AQ2KHT3 1053 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 MGAT5BQ3V5L5 792 aa18.19■□□□□ 0.5
CLN6-202ENST00000538696 PKDCCQ504Y2 493 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms