RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 UFL1O94874 794 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 DHRS4L1P0CG22 281 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ERFP50548 548 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 THOP1P52888 689 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 TXNL4AP83876 142 aaKnown RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 CENPCQ03188 943 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 CYP2A13Q16696 494 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 TIGD2Q4W5G0 525 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 KAZNQ674X7 775 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 CLVS1Q8IUQ0 354 aaPredicted RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 RAD54LQ92698 747 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 HPS1Q92902 700 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 CD101Q93033 1021 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 CEP295NLQ96MC4 621 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 KCNK16Q96T55 309 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 C1orf50Q9BV19 199 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 CDH22Q9UJ99 828 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ITGA11Q9UKX5 1188 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 APOBEC2Q9Y235 224 aaKnown RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 POMPQ9Y244 141 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 RBMX2Q9Y388 322 aaKnown RBP12.94□□□□□ -0.34
USP3-203ENST00000538686 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
USP3-203ENST00000538686 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 H3BNH8 94 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 KLHL2O95198 593 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CRYZL1O95825 349 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 RPA1P27694 616 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SLC1A1P43005 524 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 NLRP6P59044 892 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CHRNEQ04844 493 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 STX3Q13277 289 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 EPHA7Q15375 998 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 AGMOQ6ZNB7 445 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 DYMQ7RTS9 669 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 TCP10LQ8TDR4 215 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ARHGEF26Q96DR7 871 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 TMA16Q96EY4 203 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 PNPLA3Q9NST1 481 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 PTBP2Q9UKA9 531 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 COG5Q9UP83 839 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ANGPTL3Q9Y5C1 460 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 A0A087WXM4 84 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ZNF839A8K0R7 811 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 FAM189A1O60320 539 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SNAP91O60641 907 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CAPNS1P04632 268 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 M6PRP20645 277 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 COMTP21964 271 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 COPAP53621 1224 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 ADAM17P78536 824 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 COASYQ13057 564 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 LSM12Q3MHD2 195 aaKnown RBP12.93□□□□□ -0.34
USP3-203ENST00000538686 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 C4orf22Q6V702 233 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CCDC81Q6ZN84 652 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 BANPQ8N9N5 519 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SYT11Q9BT88 431 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SLC7A5P2Q9GIP4 190 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 CDH19Q9H159 772 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 DSEQ9UL01 958 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 STRIP2Q9ULQ0 834 aa12.93□□□□□ -0.34
USP3-203ENST00000538686 DNAJC16Q9Y2G8 782 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms