RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CLIC5Q9NZA1 410 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 INHBAP08476 426 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 CPOXP36551 454 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 MAGEA8P43361 318 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 CYP24A1Q07973 514 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 BST1Q10588 318 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 TMEM259Q4ZIN3 620 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 TMEM179Q6ZVK1 233 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 MIER3Q7Z3K6 550 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 PRR12Q9ULL5 1215 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 SSX2IPQ9Y2D8 614 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 COPEO14579 308 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 HNRNPRO43390 633 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 SERPINA6P08185 405 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 VIL1P09327 827 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CCDC166P0CW27 439 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 SETSIPP0DME0 302 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CHN2P52757 468 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 AQP4P55087 323 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 LRRC36Q1X8D7 754 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 MMEL1Q495T6 779 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 PPP1R2P3Q6NXS1 205 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 UBR3Q6ZT12 1888 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ZFPM1Q8IX07 1006 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 PYDC1Q8WXC3 89 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 POMGNT1Q8WZA1 660 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ACAP3Q96P50 834 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 HSFX1Q9UBD0 423 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ZNRF3Q9ULT6 936 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 TBX20Q9UMR3 447 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 PRR5-ARHGAP8B1AHC4 643 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 DDX39AO00148 427 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CFHP08603 1231 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CDKN2BP42772 138 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 AQP5P55064 265 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ARHGAP8P85298 464 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 TMPRSS15P98073 1019 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 ZNF200P98182 395 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 EN1Q05925 392 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 DLG1Q12959 904 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 PDK3Q15120 406 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 MAP4K3Q8IVH8 894 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CERS5Q8N5B7 392 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 SORCS3Q9UPU3 1222 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 QSER1Q2KHR3 1735 aa19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 MYH9P35579 1960 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-207ENST00000538548 CSDE1O75534 798 aaKnown RBP19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 OR6B1O95007 311 aa19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 ALDH18A1P54886 795 aaKnown RBP19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 RPL7AP62424 266 aaKnown RBP19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 PDE1BQ01064 536 aa19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 ANKRD20A4Q4UJ75 823 aa19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 RNF111Q6ZNA4 994 aa19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 E2F7Q96AV8 911 aa19.39■□□□□ 0.7
SFSWAP-207ENST00000538548 TCRBV9S1A1TA0A576 114 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 BTBD19C9JJ37 291 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 AOC1P19801 751 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 GDF10P55107 478 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 LPCAT4Q643R3 524 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 UGT2A3Q6UWM9 527 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 GDPD5Q8WTR4 605 aa19.39■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM191CA6NGB0 347 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 ARHGAP42A6NI28 874 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 PFDN1O60925 122 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 COQ9O75208 318 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM63AO94886 807 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM191BP0C7N4 346 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 SCNN1DP51172 638 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 PSMC5P62195 406 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 KBTBD12Q3ZCT8 623 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 APOBEC3HQ6NTF7 200 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 CDHR3Q6ZTQ4 885 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 JADE3Q92613 823 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 BTBD9Q96Q07 612 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 GPRC5CQ9NQ84 441 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 DDX56Q9NY93 547 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 ADAMTS6Q9UKP5 1117 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 CHMP2BQ9UQN3 213 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 RIMBP2O15034 1052 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 CCNT2O60583 730 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 MMP10P09238 476 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 PEX2P28328 305 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 DEUP1Q05D60 604 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 ENPEPQ07075 957 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 MTM1Q13496 603 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 ACBD5Q5T8D3 534 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 CRLF3Q8IUI8 442 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 PRICKLE1Q96MT3 831 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 SIRPGQ9P1W8 387 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 XPO7Q9UIA9 1087 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 ZBTB12Q9Y330 459 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 PLLPQ9Y342 182 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 SIPA1L1O43166 1804 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 TCRBV7S3A2A0A539 114 aa19.38■□□□□ 0.69
SFSWAP-207ENST00000538548 FAM155BO75949 473 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms