RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 YY1P25490 414 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 BRCC3P46736 316 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 VEGFBP49765 207 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 NDUFV1P49821 464 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 HESX1Q9UBX0 185 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 KPNA6O60684 536 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 SHBGP04278 402 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 INHAP05111 366 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 HSPA6P17066 643 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 CHKAP35790 457 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 GABRB2P47870 512 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 CEP85LQ5SZL2 805 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 NETO2Q8NC67 525 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 FAM71BQ8TC56 605 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 RUFY1Q96T51 708 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 TMEM121Q9BTD3 319 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 RABEP2Q9H5N1 569 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 FAM114A2Q9NRY5 505 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 TMEM30AQ9NV96 361 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 USP18Q9UMW8 372 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 SYNJ2BP-COX16A0A087WUM0 186 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 ERICH4A6NGS2 130 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 C2CD4BA6NLJ0 364 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 THP07101 528 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 MAN1A1P33908 653 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 HSPA9P38646 679 aaKnown RBP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 CDKN2BP42772 138 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 CACNA2D1P54289 1103 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 PITX1P78337 314 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 MBTPS1Q14703 1052 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 ZC3H12AQ5D1E8 599 aaKnown RBP14.84□□□□□ -0.03
ACTN1-205ENST00000538545 NPNTQ6UXI9 565 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 SMIM23A6NLE4 172 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 B4GALT3O60512 393 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 PLCB3Q01970 1234 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CA9Q16790 459 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 MDH1BQ5I0G3 518 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 HP1BP3Q5SSJ5 553 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-205ENST00000538545 SYCP2LQ5T4T6 812 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 GSTA5Q7RTV2 222 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 C12orf50Q8NA57 414 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-205ENST00000538545 SENP8Q96LD8 212 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF560Q96MR9 790 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 ACBD3Q9H3P7 528 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 TMPRSS4Q9NRS4 437 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CALCOCO1Q9P1Z2 691 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 RASAL2Q9UJF2 1139 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CASP8AP2Q9UKL3 1982 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 PODXLO00592 558 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CST8O60676 142 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 LMAN1P49257 510 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 CYP4V2Q6ZWL3 525 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-205ENST00000538545 FUKQ8N0W3 1084 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 B3GALNT2Q8NCR0 500 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF296Q8WUU4 475 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-205ENST00000538545 KCNK16Q96T55 309 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 GDAP2Q9NXN4 497 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF148Q9UQR1 794 aa14.83□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF638Q14966 1978 aaKnown RBP14.82□□□□□ -0.04
ACTN1-205ENST00000538545 CDH23Q9H251 3354 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 MYBPHLA2RUH7 354 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 IFNB1P01574 187 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 GPD1P21695 349 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 FNTAP49354 379 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 SV2CQ496J9 727 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 TFDP3Q5H9I0 405 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 RCOR2Q8IZ40 523 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 NIPA2Q8N8Q9 360 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 KCTD6Q8NC69 237 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 EPB41L4BQ9H329 900 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.82□□□□□ -0.04
ACTN1-205ENST00000538545 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
ACTN1-205ENST00000538545 GPR182O15218 404 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 RNF8O76064 485 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 B3GAT3O94766 335 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 PECAM1P16284 738 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-205ENST00000538545 KDELR1P24390 212 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 IVDP26440 423 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 ADCY8P40145 1251 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 GDF10P55107 478 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 NNTQ13423 1086 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 TIGD5Q53EQ6 642 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 LHX8Q68G74 356 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 PPP1R2P3Q6NXS1 205 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 RNF180Q86T96 592 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 RTN4RL1Q86UN2 441 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms