RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SNX25Q9H3E2 840 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 VRTNQ9H8Y1 702 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 CRTAC1Q9NQ79 661 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 DUS2Q9NX74 493 aaKnown RBP9.23□□□□□ -0.93
DDB1-212ENST00000538470 TRPM5Q9NZQ8 1165 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
DDB1-212ENST00000538470 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 SLC8A2Q9UPR5 921 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 CNOT1A5YKK6 2376 aaKnown RBP9.23□□□□□ -0.93
DDB1-212ENST00000538470 TPRP12270 2363 aaKnown RBP9.23□□□□□ -0.93
DDB1-212ENST00000538470 PLXND1Q9Y4D7 1925 aa9.23□□□□□ -0.93
DDB1-212ENST00000538470 NUP205Q92621 2012 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 MED19A0JLT2 244 aaPredicted RBP9.22□□□□□ -0.93
DDB1-212ENST00000538470 OTOL1A6NHN0 477 aaPredicted RBP9.22□□□□□ -0.93
DDB1-212ENST00000538470 HRO43593 1189 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 RNF40O75150 1001 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 ATP2C2O75185 946 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 OLFM2O95897 454 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 EGFP01133 1207 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 MYL1P05976 194 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 BDNFP23560 247 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 LMO2P25791 158 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 GRIK1P39086 918 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 ME1P48163 572 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 TRPC3Q13507 836 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 KNOP1Q1ED39 458 aaKnown RBP9.22□□□□□ -0.93
DDB1-212ENST00000538470 EML3Q32P44 896 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 MDH1BQ5I0G3 518 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 HEATR6Q6AI08 1181 aaKnown RBP9.22□□□□□ -0.93
DDB1-212ENST00000538470 PRR23CQ6ZRP0 262 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 DDX42Q86XP3 938 aaKnown RBP eCLIP9.22□□□□□ -0.93
DDB1-212ENST00000538470 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 ARL14EPQ8N8R7 260 aaPredicted RBP9.22□□□□□ -0.93
DDB1-212ENST00000538470 SH3RF2Q8TEC5 729 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 TMEM174Q8WUU8 243 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 OVCA2Q8WZ82 227 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 CD101Q93033 1021 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 SEMA4GQ9NTN9 838 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 C2orf42Q9NWW7 574 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 USP25Q9UHP3 1055 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 WNT6Q9Y6F9 365 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 ACACBO00763 2458 aa9.22□□□□□ -0.93
DDB1-212ENST00000538470 SDK1Q7Z5N4 2213 aa9.21□□□□□ -0.93
DDB1-212ENST00000538470 MYOFQ9NZM1 2061 aa9.21□□□□□ -0.93
DDB1-212ENST00000538470 C2orf78A6NCI8 922 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 A8MXQ7 604 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 F8VP50 259 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLC9A3R1O14745 358 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLC30A4O14863 429 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 CLIC2O15247 247 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 EXOC3O60645 756 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 RPP40O75818 363 aaKnown RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 RTN3O95197 1032 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 EPN2O95208 641 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 CST3P01034 146 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 PDGFRBP09619 1106 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLFN14P0C7P3 912 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 HDCP19113 662 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 GNL1P36915 607 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 ATXN1P54253 815 aaKnown RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLC7A9P82251 487 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SRSF5Q13243 272 aaKnown RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 PKN3Q6P5Z2 889 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SYT13Q7L8C5 426 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 CACNA2D4Q7Z3S7 1137 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 RDH13Q8NBN7 331 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 B3GALNT2Q8NCR0 500 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 PDZD8Q8NEN9 1154 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 OR6B3Q8NGW1 331 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 CCDC127Q96BQ5 260 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLITRK1Q96PX8 696 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 SLC22A12Q96S37 553 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 MRPL45Q9BRJ2 306 aaKnown RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.94
DDB1-212ENST00000538470 XYLT2Q9H1B5 865 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 BLZF1Q9H2G9 400 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 EXOC1Q9NV70 894 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 PCDHA7Q9UN72 937 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 PCDHGA5Q9Y5G8 931 aa9.21□□□□□ -0.94
DDB1-212ENST00000538470 ZNF840PA6NDX5 716 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 LEFTY2O00292 366 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
DDB1-212ENST00000538470 KLRC4O43908 158 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 PHACTR2O75167 634 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 APBB3O95704 486 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 OAS1P00973 400 aaKnown RBP9.2□□□□□ -0.94
DDB1-212ENST00000538470 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 P4HA1P13674 534 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 PTPN1P18031 435 aaKnown RBP9.2□□□□□ -0.94
DDB1-212ENST00000538470 EIF2DP41214 584 aaKnown RBP9.2□□□□□ -0.94
DDB1-212ENST00000538470 AFMP43652 599 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 GALK1P51570 392 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 LIMK1P53667 647 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 MYL6P60660 151 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 USP46P62068 366 aa9.2□□□□□ -0.94
DDB1-212ENST00000538470 CLDN10P78369 228 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms