RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ITGALP20701 1170 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 TROAPQ12815 778 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 TMC7Q7Z402 723 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 SLFN11Q7Z7L1 901 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 INPP5DQ92835 1189 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CGRRF1Q99675 332 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 TRIM10Q9UDY6 481 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 RPS6KL1Q9Y6S9 549 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 DYRK3O43781 588 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 SREBF1P36956 1147 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 NPTX2P47972 431 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 ACTN3Q08043 901 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 DDX39BQ13838 428 aaKnown RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CBWD2Q8IUF1 395 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 HERC6Q8IVU3 1022 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 ZNF513Q8N8E2 541 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-205ENST00000538291 JADE3Q92613 823 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 SGF29Q96ES7 293 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 CAPN10Q9HC96 672 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
SCARB1-205ENST00000538291 SLC12A8A0AV02 714 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 EFEMP1Q12805 493 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 SLC13A5Q86YT5 568 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ACSF2Q96CM8 615 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 XPO6Q96QU8 1125 aaKnown RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 RHOCP08134 193 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 DARSP14868 501 aaKnown RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TCF3P15923 654 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 SOX11P35716 441 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 FNTAP49354 379 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 CTCFP49711 727 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 KLK7P49862 253 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 KCTD10Q9H3F6 313 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 CCDC134Q9H6E4 229 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 HPS4Q9NQG7 708 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 RNF112Q9ULX5 631 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 FDPSP14324 419 aaKnown RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 KLRK1P26718 216 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ERFP50548 548 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ITIH5Q86UX2 942 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 LONP2Q86WA8 852 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ZNF518BQ9C0D4 1074 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ZC4H2Q9NQZ6 224 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TMEM120BA0PK00 339 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TRIM49D1C9J1S8 452 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ARP10275 920 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 KPNA1P52294 538 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 RHOAP61586 193 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 ORC1Q13415 861 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 CHI3L2Q15782 390 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 DENND5BQ6ZUT9 1274 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TXNRD3Q86VQ6 643 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 PLD3Q8IV08 490 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 UNC45BQ8IWX7 931 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 CYGBQ8WWM9 190 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 CARD9Q9H257 536 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 MANSC1Q9H8J5 431 aa17.42■□□□□ 0.38
SCARB1-205ENST00000538291 PNMA8BQ9ULN7 279 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-205ENST00000538291 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 ALDH2P05091 517 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 RUNX1T1Q06455 604 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 NFIAQ12857 509 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 RAD9BQ6WBX8 426 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-205ENST00000538291 SH2D3CQ8N5H7 860 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 ECSITQ9BQ95 431 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 THAP2Q9H0W7 228 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 IL1RL2Q9HB29 575 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 MAP3K13O43283 966 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 GYPCP04921 128 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 GYS1P13807 737 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 VEGFAP15692 232 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-205ENST00000538291 GRB10Q13322 594 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 ADCK1Q86TW2 530 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 MYO1HQ8N1T3 1032 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 GMCL1P1Q8NEA9 526 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 DTX3LQ8TDB6 740 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 UBE2OQ9C0C9 1292 aaKnown RBP17.41■□□□□ 0.38
SCARB1-205ENST00000538291 EHD4Q9H223 541 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 CHORDC1Q9UHD1 332 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-205ENST00000538291 GRK3P35626 688 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 PCNX4Q63HM2 1172 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 PHACTR4Q8IZ21 702 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 ZSWIM1Q9BR11 485 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 THTPAQ9BU02 230 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 CLPBQ9H078 707 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 KANSL3Q9P2N6 904 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 PLA2G4CQ9UP65 541 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 MED24O75448 989 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 BTKQ06187 659 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 CDC16Q13042 620 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 P3H2Q8IVL5 708 aa17.41■□□□□ 0.38
SCARB1-205ENST00000538291 CCDC126Q96EE4 140 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms