RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CYP11B1P15538 503 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 YWHAQP27348 245 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 CD52P31358 61 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 CARSP49589 748 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 RGS4P49798 205 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ATXN3P54252 364 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 PTPAQ15257 358 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NFE2Q16621 373 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 BEND6Q5SZJ8 279 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 C15orf52Q6ZUT6 534 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 SYDE1Q6ZW31 735 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 SMARCD1Q96GM5 515 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 XPO6Q96QU8 1125 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CDK5RAP1Q96SZ6 601 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CYTH2Q99418 400 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TUBB6Q9BUF5 446 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NT5MQ9NPB1 228 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ANLNQ9NQW6 1124 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ADA2Q9NZK5 511 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 PEX10O60683 326 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ALDH1A2O94788 518 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 HMGCRP04035 888 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PLEKP08567 350 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 EEF1B2P24534 225 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CDH8P55286 799 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TBX4P57082 545 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 UNC45BQ8IWX7 931 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 EMC1Q8N766 993 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ADAM32Q8TC27 787 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 CCDC138Q96M89 665 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 GBP5Q96PP8 586 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TGS1Q96RS0 853 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CORO1BQ9BR76 489 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 CERS4Q9HA82 394 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ZFP69BQ9UJL9 534 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 KIAA1257Q9ULG3 409 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 COL14A1Q05707 1796 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 A0A1W2PQJ5 194 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 SSU72P8A0A1W2PR75 194 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 POLBP06746 335 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 GRK4P32298 578 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NDUFV1P49821 464 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 GEMP55040 296 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PTPN11Q06124 597 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 NBPF20Q3BBV1 942 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NAPEPLDQ6IQ20 393 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 OTULINQ96BN8 352 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 KLHL29Q96CT2 875 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 LRRC1Q9BTT6 524 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 FBXO44Q9H4M3 255 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 HES2Q9Y543 173 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ALG6Q9Y672 507 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NFASCO94856 1347 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 HNRNPCL2B2RXH8 293 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 KDM1AO60341 852 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 HNRNPCL1O60812 293 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 ANXA9O76027 345 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 EVX2Q03828 476 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TIGD7Q6NT04 549 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 ANKRD23Q86SG2 305 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PHACTR4Q8IZ21 702 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 RBM15Q96T37 977 aaKnown RBP eCLIP5.57□□□□□ -1.52
LRP6-203ENST00000538239 IRX2Q9BZI1 471 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NUDT5Q9UKK9 219 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TSPAN16Q9UKR8 245 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 BARX2Q9UMQ3 279 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 LTN1O94822 1766 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ASTN2O75129 1339 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 NCF1BA6NI72 391 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 NCF1CA8MVU1 366 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 SRP72O76094 671 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 NCF1P14598 390 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 GYS2P54840 703 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 MDM2Q00987 491 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 LONRF1Q17RB8 773 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ZNF284Q2VY69 593 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PLPP4Q5VZY2 271 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 ZNF669Q96BR6 464 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CCDC124Q96CT7 223 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 CELF6Q96J87 481 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 UXTQ9UBK9 157 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 AP4E1Q9UPM8 1137 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TRIM66O15016 1216 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 GYPCP04921 128 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 GJB1P08034 283 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 USP17L7P0C7H9 530 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 SOAT1P35610 550 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 KCNJ1P48048 391 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 BTKQ06187 659 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 PDCLQ13371 301 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 LGI2Q8N0V4 545 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 CALML6Q8TD86 181 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 FICDQ9BVA6 458 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 UBXN6Q9BZV1 441 aa5.56□□□□□ -1.52
LRP6-203ENST00000538239 HPS4Q9NQG7 708 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms