RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 PHF7Q9BWX1 381 aaPredicted RBP13.88□□□□□ -0.19
CHFR-216ENST00000538235 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 TJP2Q9UDY2 1190 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHFR-216ENST00000538235 F8VZ95 297 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 CYP26A1O43174 497 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 XYLBO75191 536 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 CD19P15391 556 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 FSHRP23945 695 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 GRIK1P39086 918 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 ALDH1A3P47895 512 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 SLC5A3P53794 718 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 UBXN1Q04323 297 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 NR1I3Q14994 352 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 DENND1BQ6P3S1 775 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 RTL10Q7L3V2 364 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 ADHFE1Q8IWW8 467 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 BAP1Q92560 729 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 FGF13Q92913 245 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 SMARCD1Q96GM5 515 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 HEXIM2Q96MH2 286 aaKnown RBP13.87□□□□□ -0.19
CHFR-216ENST00000538235 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 RPP25Q9BUL9 199 aaKnown RBP13.87□□□□□ -0.19
CHFR-216ENST00000538235 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
CHFR-216ENST00000538235 AVENQ9NQS1 362 aaPredicted RBP13.87□□□□□ -0.19
CHFR-216ENST00000538235 MIA3Q5JRA6 1907 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 MICAL2O94851 1124 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 PRAMEF12O95522 483 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 ASGR2P07307 311 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 PAEPP09466 180 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 KRT5P13647 590 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 NPR3P17342 541 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 PTPN2P17706 415 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 GABRR2P28476 465 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 TUFMP49411 452 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 EPHB3P54753 998 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 PDE4CQ08493 712 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 CETN1Q12798 172 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 IFRD2Q12894 506 aaPredicted RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 MAPRE1Q15691 268 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 CYP26C1Q6V0L0 522 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 SLC20A1Q8WUM9 679 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 DDX1Q92499 740 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 NDRG1Q92597 394 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 TRMT2BQ96GJ1 504 aaKnown RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 SPATA17Q96L03 361 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 MYRFLQ96LU7 910 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 NECTIN4Q96NY8 510 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 COL25A1Q9BXS0 654 aaPredicted RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 FAM124BQ9H5Z6 455 aaPredicted RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 DMAP1Q9NPF5 467 aaPredicted RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 OSER1Q9NX31 292 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 IL37Q9NZH6 218 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 IFNKQ9P0W0 207 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 DPP7Q9UHL4 492 aa13.86□□□□□ -0.19
CHFR-216ENST00000538235 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
CHFR-216ENST00000538235 TECTAO75443 2155 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 FAM200BP0CF97 657 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 VDRP11473 427 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 MFAP3P55082 362 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 ZXDBP98169 803 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 AAK1Q2M2I8 961 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 PUS10Q3MIT2 529 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 LCLAT1Q6UWP7 414 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 NOP9Q86U38 636 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 WDTC1Q8N5D0 677 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 FGF14Q92915 247 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 MCRS1Q96EZ8 462 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 ZNF512Q96ME7 567 aaPredicted RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 LRRC3BQ96PB8 259 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 DUSP16Q9BY84 665 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 PLA2G2FQ9BZM2 168 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 XPO4Q9C0E2 1151 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 SMG9Q9H0W8 520 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 ASAH2Q9NR71 780 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 NOCTQ9UK39 431 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
CHFR-216ENST00000538235 MYOFQ9NZM1 2061 aa13.85□□□□□ -0.19
CHFR-216ENST00000538235 C2orf78A6NCI8 922 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms