RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RPL10AP62906 217 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 C15orf59Q2T9L4 293 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 ANKRD33Q7Z3H0 272 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 ADGRD2Q7Z7M1 963 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CIR1Q86X95 450 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 COLGALT1Q8NBJ5 622 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 MAFAQ8NHW3 353 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 CLEC4CQ8WTT0 213 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 RSAD2Q8WXG1 361 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 EMID1Q96A84 441 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 NHEJ1Q9H9Q4 299 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 RGS18Q9NS28 235 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 GMIPQ9P107 970 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 LSM7Q9UK45 103 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 SNX10Q9Y5X0 201 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 MYH8P13535 1937 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 TIAM2Q8IVF5 1701 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CACNA1AO00555 2505 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 IGKV6D-21A0A0A0MT36 114 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CBX4O00257 560 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 KRT86O43790 486 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 FERP16591 822 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 RRM1P23921 792 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 EPHB2P29323 1055 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 RECQLP46063 649 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 KIF11P52732 1056 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CDK17Q00537 523 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 PSMD6Q15008 389 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 TOGARAM2Q6ZUX3 1019 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 ARMCX6Q7L4S7 300 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 PACSIN1Q9BY11 444 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CCDC113Q9H0I3 377 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 APOBEC3GQ9HC16 384 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 SPAG17Q6Q759 2223 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CAVIN2O95810 425 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 ABCD1P33897 745 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 HOXD13P35453 343 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 TUFMP49411 452 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 CDK7P50613 346 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 SOWAHAQ2M3V2 549 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 KLHDC7AQ5VTJ3 777 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CSGALNACT1Q8TDX6 532 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 SKA2Q8WVK7 121 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 LINC01599Q8WXQ3 324 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 PPP1R13BQ96KQ4 1090 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CDX2Q99626 313 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 TM6SF2Q9BZW4 377 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 CFAP97Q9P2B7 532 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 ITGA11Q9UKX5 1188 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 NCK2O43639 380 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TACC1O75410 805 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 RPLP2P05387 115 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 SOX5P35711 763 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 SNX16P57768 344 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TAP1Q03518 808 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TEAD2Q15562 447 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 CYP26C1Q6V0L0 522 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 RPL10LQ96L21 214 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 UPF3AQ9H1J1 476 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 KCTD10Q9H3F6 313 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 DUSP10Q9Y6W6 482 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 NEDD8-MDP1E9PL57 170 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 INPPL1O15357 1258 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TGM5O43548 720 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 KRT1P04264 644 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 CYBBP04839 570 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 ATXN1P54253 815 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 CDH6P55285 790 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 ZACNQ401N2 412 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 UBXN11Q5T124 520 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PRPF38BQ5VTL8 546 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 LRRC31Q6UY01 552 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 RD3Q7Z3Z2 195 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 OSTM1Q86WC4 334 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 MORC4Q8TE76 937 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 DEPDC1BQ8WUY9 529 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 NSMCE1Q8WV22 266 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TCEAL4Q96EI5 215 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 NUP85Q9BW27 656 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 DMAP1Q9NPF5 467 aaPredicted RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 LMCD1Q9NZU5 365 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 MARCH2Q9P0N8 246 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 MYO10Q9HD67 2058 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 KIAA0355O15063 1070 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 MICAL2O94851 1124 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 STBD1O95210 358 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PARNO95453 639 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 ARL4AP40617 200 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PAFAH1B1P43034 410 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 KCNQ1P51787 676 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PCSK7Q16549 785 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 KYAT1Q16773 422 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 RAP1GAP2Q684P5 730 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 CCSAPQ6IQ19 270 aaPredicted RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 PTCRAQ6ISU1 281 aaPredicted RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 KIAA1324Q6UXG2 1013 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 TRIM59Q8IWR1 403 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 DEFB106AQ8N104 65 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms