RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 C9orf57Q5W0N0 161 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 PCGF5Q86SE9 256 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 HES2Q9Y543 173 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 FAM169AQ9Y6X4 670 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 DPYSL4O14531 572 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 XPOTO43592 962 aaKnown RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 IFNB1P01574 187 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 RGS7P49802 495 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 ADAM17P78536 824 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 SNX17Q15036 470 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 TAF1CQ15572 869 aaPredicted RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 PKDCCQ504Y2 493 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 RNASEH2BQ5TBB1 312 aaKnown RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 PPP1R13LQ8WUF5 828 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 C9orf72Q96LT7 481 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 CALN1Q9BXU9 219 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 SAYSD1Q9NPB0 183 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 INTS9Q9NV88 658 aaKnown RBP16.42■□□□□ 0.22
MKS1-204ENST00000537529 GGA2Q9UJY4 613 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 APOC4-APOC2K7ER74 178 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 APOC2P02655 101 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 CD48P09326 243 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 PECAM1P16284 738 aaPredicted RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 HUNKP57058 714 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 ARHGAP17Q68EM7 881 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 TTC30AQ86WT1 665 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 OR6B3Q8NGW1 331 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 ATXN2LQ8WWM7 1075 aaKnown RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 RSAD2Q8WXG1 361 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 PEBP4Q96S96 227 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 SLC4A5Q9BY07 1137 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 LGALS13Q9UHV8 139 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 Q9Y3F1 56 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 A0A087WUV0 522 aaPredicted RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 PIK3R2O00459 728 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 MCF2LO15068 1137 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 PNPLA4P41247 253 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 HIC1Q14526 733 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 OLFML1Q6UWY5 402 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 EXOC3L1Q86VI1 746 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 CHMP6Q96FZ7 201 aa16.41■□□□□ 0.22
MKS1-204ENST00000537529 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
MKS1-204ENST00000537529 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.41■□□□□ 0.22
MKS1-204ENST00000537529 C17orf102A2RUQ5 167 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 C5orf60A6NFR6 353 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
MKS1-204ENST00000537529 CDH16O75309 829 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 AKAP5P24588 427 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 RGS2P41220 211 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 CDH6P55285 790 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 EIF3EP60228 445 aaKnown RBP16.4■□□□□ 0.22
MKS1-204ENST00000537529 SLC6A3Q01959 620 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 TFDP2Q14188 446 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 TAF5Q15542 800 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 CCDC38Q502W7 563 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 CYP4F22Q6NT55 531 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 TRNP1Q6NT89 227 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 CENPUQ71F23 418 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 TMEM110Q86TL2 294 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 ZDHHC17Q8IUH5 632 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 RIBC1Q8N443 379 aaPredicted RBP16.4■□□□□ 0.22
MKS1-204ENST00000537529 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
MKS1-204ENST00000537529 USP6NLQ92738 828 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
MKS1-204ENST00000537529 SAE1Q9UBE0 346 aaPredicted RBP16.4■□□□□ 0.22
MKS1-204ENST00000537529 A8MXQ7 604 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 TREHO43280 583 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 ENDOD1O94919 500 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 GNAT1P11488 350 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 KCNE1P15382 129 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CRYBB1P53674 252 aaPredicted RBP16.39■□□□□ 0.21
MKS1-204ENST00000537529 KRT81Q14533 505 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 CCL14Q16627 93 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SOWAHAQ2M3V2 549 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 C15orf59Q2T9L4 293 aaPredicted RBP16.39■□□□□ 0.21
MKS1-204ENST00000537529 MAP7D3Q8IWC1 876 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 PPIL6Q8IXY8 311 aa16.39■□□□□ 0.21
MKS1-204ENST00000537529 SLC35F5Q8WV83 523 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms