RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MYMKA6NI61 221 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 OR6C75A6NL08 312 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 P4HBP07237 508 aaKnown RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 C1SP09871 688 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 HSPA4P34932 840 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 TNFRSF4P43489 277 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 DMP1Q13316 513 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 TAF12Q16514 161 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 PRAMEF14Q5SWL7 426 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 CDCA2Q69YH5 1023 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 CASC1Q6TDU7 716 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 KIAA1324Q6UXG2 1013 aaKnown RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 CCDC81Q6ZN84 652 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 MAEAQ7L5Y9 396 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 SRRM1Q8IYB3 904 aaKnown RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 ARL14EPQ8N8R7 260 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 ENGASEQ8NFI3 743 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 MRPS31Q92665 395 aaKnown RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 DYDC2Q96IM9 177 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 VCPIP1Q96JH7 1222 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 ADPGKQ9BRR6 497 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 CCDC113Q9H0I3 377 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 TUBGCP4Q9UGJ1 667 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 ZMYM5Q9UJ78 669 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 MAGED2Q9UNF1 606 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-217ENST00000537162 ANKRD6Q9Y2G4 727 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 NFE2L3Q9Y4A8 694 aa10.31□□□□□ -0.76
CPSF7-217ENST00000537162 PDZD2O15018 2839 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 C2orf78A6NCI8 922 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 METTL12A8MUP2 240 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 TRIM24O15164 1050 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 TRAK2O60296 914 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 COL8A1P27658 744 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 GRNP28799 593 aaKnown RBP10.3□□□□□ -0.76
CPSF7-217ENST00000537162 RPL9P32969 192 aaKnown RBP10.3□□□□□ -0.76
CPSF7-217ENST00000537162 GRIA2P42262 883 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 GABREP78334 506 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 RESTQ13127 1097 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 DHCR24Q15392 516 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 ARL13BQ3SXY8 428 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 SLC39A12Q504Y0 691 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 NT5DC1Q5TFE4 455 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 SDHAF4Q5VUM1 108 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 EGFLAMQ63HQ2 1017 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 RHBDF2Q6PJF5 856 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 OTUD6AQ7L8S5 288 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 FILIP1Q7Z7B0 1213 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 PTRH1Q86Y79 214 aaKnown RBP10.3□□□□□ -0.76
CPSF7-217ENST00000537162 ADGRG2Q8IZP9 1017 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 BSNDQ8WZ55 320 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 IGSF8Q969P0 613 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 GCNT4Q9P109 453 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 ADGRG4Q8IZF6 3080 aa10.3□□□□□ -0.76
CPSF7-217ENST00000537162 CITO14578 2027 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 SLC37A4O43826 429 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
CPSF7-217ENST00000537162 CKMP06732 381 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 USP17L7P0C7H9 530 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 CDK4P11802 303 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 NTSR1P30989 418 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 LIFRP42702 1097 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 TUFMP49411 452 aaKnown RBP10.29□□□□□ -0.76
CPSF7-217ENST00000537162 PPP2R5CQ13362 524 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 MYBPC2Q14324 1141 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 SHBQ15464 509 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 PFKFB3Q16875 520 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-217ENST00000537162 DCAF4L1Q3SXM0 396 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 TICAM1Q8IUC6 712 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 EID2Q8N6I1 236 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 CADM4Q8NFZ8 388 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 TBCKQ8TEA7 893 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 RFFLQ8WZ73 363 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 SLC38A7Q9NVC3 462 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 HSFX1Q9UBD0 423 aa10.29□□□□□ -0.76
CPSF7-217ENST00000537162 ZFC3H1O60293 1989 aaKnown RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 NBASA2RRP1 2371 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 ACKR2O00590 384 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 PAPSS1O43252 624 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 DKC1O60832 514 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 RNF224P0DH78 156 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 HAPLN1P10915 354 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 KCNE1P15382 129 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 CDC27P30260 824 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 AFF3P51826 1226 aaKnown RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 ERVPABLB-1P60509 514 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 ATP2C1P98194 919 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 INF2Q27J81 1249 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 OVOS1Q6IE37 1185 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 CACTIN-AS1Q8N1I8 211 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 NAT16Q8N8M0 369 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 ARHGAP9Q9BRR9 750 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 TMEM206Q9H813 350 aa10.28□□□□□ -0.76
CPSF7-217ENST00000537162 USP36Q9P275 1121 aaKnown RBP10.28□□□□□ -0.76
CPSF7-217ENST00000537162 PLXNA2O75051 1894 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms