RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PAEPP09466 180 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GNA15P30679 374 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TAF6P49848 677 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LILRA4P59901 499 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DEFB103AP81534 67 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UPP1Q16831 310 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SEL1L2Q5TEA6 688 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ACAD10Q6JQN1 1059 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZDHHC24Q6UX98 284 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 C12orf50Q8NA57 414 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 OR2W6PQ8NHA6 318 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF564Q8TBZ8 553 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ELOVL4Q9GZR5 314 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RABEP2Q9H5N1 569 aa13.65□□□□□ -0.22
CDK5RAP3-202ENST00000536708 INPPL1O15357 1258 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CILPO75339 1184 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SYN1P17600 705 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PBX3P40426 434 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TUSC3Q13454 348 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MESDQ14696 234 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZDHHC14Q8IZN3 488 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TLCD1Q96CP7 247 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 EPB41L4BQ9H329 900 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FAM107AO95990 144 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MARCKSL1P49006 195 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FNTAP49354 379 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NDST1P52848 882 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RAD23BP54727 409 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PPP2R2AP63151 447 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 INCA1Q0VD86 236 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SIX1Q15475 284 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SV2CQ496J9 727 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MFSD5Q6N075 450 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SLC13A5Q86YT5 568 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SLC4A11Q8NBS3 891 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MAGOHBQ96A72 148 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CASD1Q96PB1 797 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NUP85Q9BW27 656 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LRFN2Q9ULH4 789 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CHD7Q9P2D1 2997 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 THAP12O43422 761 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PYGMP11217 842 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 P4HA1P13674 534 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BRCC3P46736 316 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 DSC1Q08554 894 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CLEC16AQ2KHT3 1053 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 COL13A1Q5TAT6 717 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 AADACL2Q6P093 401 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CROCCP2Q86T23 111 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZNF677Q86XU0 584 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MYCBPAPQ8TBZ2 947 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SLCO2A1Q92959 643 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CCT8L2Q96SF2 557 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TMEM109Q9BVC6 243 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ELAC1Q9H777 363 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NLRC5Q86WI3 1866 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 HNRNPH1P31943 449 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RFC2P35250 354 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 COILP38432 576 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PNPLA4P41247 253 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PMS2P54278 862 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RWDD2BP57060 319 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 IKBKEQ14164 716 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TIGD5Q53EQ6 642 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MICALCLQ6ZW33 695 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 OTOP2Q7RTS6 562 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ADAT2Q7Z6V5 191 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 HOOK3Q86VS8 718 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms