RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CYP4F8P98187 520 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 HTR4Q13639 388 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PARM1Q6UWI2 310 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GPRIN1Q7Z2K8 1008 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LUZP1Q86V48 1076 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FGF14Q92915 247 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 HEXIM2Q96MH2 286 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 RPP25Q9BUL9 199 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TTLL2Q9BWV7 592 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KCNK12Q9HB15 430 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CBX8Q9HC52 389 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ATP8B3O60423 1300 aa12□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LRRC10BA6NIK2 292 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 O00370 1275 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 DLL1O00548 723 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FAM200BP0CF97 657 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ANXA13P27216 316 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SLC5A3P53794 718 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TAF12Q16514 161 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FAM78AQ5JUQ0 283 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 DENND5BQ6ZUT9 1274 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TTC30AQ86WT1 665 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SCAMP5Q8TAC9 235 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CEP295NLQ96MC4 621 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ASB16Q96NS5 453 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GPR88Q9GZN0 384 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ATXN3LQ9H3M9 355 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GDE1Q9NZC3 331 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FHOD1Q9Y613 1164 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZFP37Q9Y6Q3 630 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NUMBLQ9Y6R0 609 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 COL4A2P08572 1712 aa11.99□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 EPHB6O15197 1021 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FGF19O95750 216 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PAEPP09466 180 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PNMA6AP0CW24 399 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 VDRP11473 427 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CD19P15391 556 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NPR3P17342 541 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 BRD2P25440 801 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CDC25CP30307 473 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 MFAP3P55082 362 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 IFRD2Q12894 506 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PTPN21Q16825 1174 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ARHGAP44Q17R89 818 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GOLGA7BQ2TAP0 167 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GPR158Q5T848 1215 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KLHDC7AQ5VTJ3 777 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ENOSF1Q7L5Y1 443 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NUP93Q8N1F7 819 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ZSCAN18Q8TBC5 510 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SHC3Q92529 594 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 LSM14BQ9BX40 385 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 DUSP16Q9BY84 665 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PLA2G2FQ9BZM2 168 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GANQ9H2C0 597 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ACP6Q9NPH0 428 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 IL37Q9NZH6 218 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 UXTQ9UBK9 157 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 DNAJC12Q9UKB3 198 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TSPAN16Q9UKR8 245 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SIK3Q9Y2K2 1263 aa11.98□□□□□ -0.49
TNFRSF1A-208ENST00000536194 NCOR1O75376 2440 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 FAM92AA1XBS5 289 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 C2orf78A6NCI8 922 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TULP2O00295 520 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PRAMEF12O95522 483 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KRT5P13647 590 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 UCHL3P15374 230 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PGFP49763 221 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TAF10Q12962 218 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TXNDC8Q6A555 127 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TANGO2Q6ICL3 276 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SLC44A3Q8N4M1 653 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 RSPRY1Q96DX4 576 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 KXD1Q9BQD3 176 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SLITRK6Q9H5Y7 841 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 EPHX3Q9H6B9 360 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 PLCB1Q9NQ66 1216 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 IGSF9Q9P2J2 1179 aa11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.97□□□□□ -0.49
TNFRSF1A-208ENST00000536194 SORCS3Q9UPU3 1222 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms