RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 LAMTOR4Q0VGL1 99 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 ZNF449Q6P9G9 518 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 MIPOL1Q8TD10 442 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CISHQ9NSE2 258 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 TMCO1Q9UM00 188 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CHKBQ9Y259 395 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 EFR3BQ9Y2G0 817 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 IGKV6-21A0A0C4DH24 114 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 MKRN3Q13064 507 aaKnown RBP18.79■□□□□ 0.6
RAB40C-203ENST00000535977 NR1H3Q13133 447 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 TFDP1Q14186 410 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 FRMD8P1Q9BZ68 369 aaPredicted RBP18.79■□□□□ 0.6
RAB40C-203ENST00000535977 PDP2Q9P2J9 529 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 SNCAIPQ9Y6H5 919 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 MED7O43513 233 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 SLC25A27O95847 323 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 LMNAP02545 664 aaKnown RBP18.79■□□□□ 0.6
RAB40C-203ENST00000535977 TNNC2P02585 160 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 T-ENOLP0DO92 83 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 STX2P32856 288 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 SLC26A2P50443 739 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 MYL6P60660 151 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 OCRLQ01968 901 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 NCSTNQ92542 709 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 CFAP57Q96MR6 1250 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 DDX50Q9BQ39 737 aaKnown RBP18.79■□□□□ 0.6
RAB40C-203ENST00000535977 PPCSQ9HAB8 311 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 ZNF510Q9Y2H8 683 aa18.79■□□□□ 0.6
RAB40C-203ENST00000535977 B4GALT4O60513 344 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 KRT1P04264 644 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 SPATA31D3P0C874 917 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 TMEM62Q0P6H9 643 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 ZFYVE27Q5T4F4 411 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 TSHZ1Q6ZSZ6 1077 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 SPATA31D4Q6ZUB0 917 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 POLNQ7Z5Q5 900 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 ANKRD36BP1Q96IX9 119 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-203ENST00000535977 SPATA16Q9BXB7 569 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 MTMR12Q9C0I1 747 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 LHX5Q9H2C1 402 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 METTL5Q9NRN9 209 aaKnown RBP18.78■□□□□ 0.6
RAB40C-203ENST00000535977 WDR90Q96KV7 1748 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 DNALI1O14645 258 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-203ENST00000535977 UBTFL6P0CB48 400 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-203ENST00000535977 TNFSF9P41273 254 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 RPL7AP62424 266 aaKnown RBP18.78■□□□□ 0.6
RAB40C-203ENST00000535977 TFDP3Q5H9I0 405 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 RFWD3Q6PCD5 774 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 MPZL3Q6UWV2 235 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 SPOCD1Q6ZMY3 1216 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 GPC2Q8N158 579 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 ZNF148Q9UQR1 794 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 CSADQ9Y600 493 aa18.78■□□□□ 0.6
RAB40C-203ENST00000535977 IL18RAPO95256 599 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 CBX6O95503 412 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 FAM200BP0CF97 657 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 INHBCP55103 352 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 VGLL4Q14135 290 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 RNF149Q8NC42 400 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 LRRC37BQ96QE4 947 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 PITPNM3Q9BZ71 974 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 A0A0G2JMZ2 1700 aa18.77■□□□□ 0.6
RAB40C-203ENST00000535977 ACKR2O00590 384 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 PROZP22891 400 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 GJC1P36383 396 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 MAGEA4P43358 317 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 USP46P62068 366 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 RCN1Q15293 331 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 ZNF699Q32M78 642 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 SEZ6Q53EL9 994 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 DAB2IPQ5VWQ8 1189 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 GPAT2Q6NUI2 795 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 ARHGEF18Q6ZSZ5 1173 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 ALLCQ8N6M5 410 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 NKD2Q969F2 451 aaPredicted RBP18.77■□□□□ 0.59
RAB40C-203ENST00000535977 MAGEB18Q96M61 343 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 MCEEQ96PE7 176 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 SLC4A7Q9Y6M7 1214 aa18.77■□□□□ 0.59
RAB40C-203ENST00000535977 SRGAP2CP0DJJ0 459 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 TAC1P20366 129 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 VPS41P49754 854 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 MORF4L2Q15014 288 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 P3H1Q32P28 736 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 CELF3Q5SZQ8 465 aaKnown RBP18.76■□□□□ 0.59
RAB40C-203ENST00000535977 PPP1R21Q6ZMI0 780 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 ANKS1BQ7Z6G8 1248 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 RBM15Q96T37 977 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■■■ 29.9
RAB40C-203ENST00000535977 GPR20Q99678 358 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
RAB40C-203ENST00000535977 ITGAVP06756 1048 aa18.76■□□□□ 0.59
RAB40C-203ENST00000535977 ETS2P15036 469 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms