RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 KIF11P52732 1056 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 CDH8P55286 799 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 SMARCB1Q12824 385 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 TDGQ13569 410 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 CNGA2Q16280 664 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 USP41Q3LFD5 358 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 SGO2Q562F6 1265 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 WSCD1Q658N2 575 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-205ENST00000535900 SLC47A2Q86VL8 602 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 TMEM105Q8N8V8 129 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 SLC4A11Q8NBS3 891 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 WHAMMQ8TF30 809 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 HASPINQ8TF76 798 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 RIN2Q8WYP3 895 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-205ENST00000535900 PAAF1Q9BRP4 392 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 LHX5Q9H2C1 402 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 RXFP1Q9HBX9 757 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 CDH9Q9ULB4 789 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 INTUQ9ULD6 942 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 DUSP12Q9UNI6 340 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 PPP2R2CQ9Y2T4 447 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
UBE3B-205ENST00000535900 ZDBF2Q9HCK1 2354 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 CCDC195A0A1B0GUA6 201 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 SOWAHDA6NJG2 315 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 OR6C75A6NL08 312 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 H7C4K7 107 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 THAP12O43422 761 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 GFRA3O60609 400 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 EFEMP2O95967 443 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 SPATA31D3P0C874 917 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 FGFR3P22607 806 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 SNX16P57768 344 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 YWHAHQ04917 246 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 KIAA0319Q5VV43 1072 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 ARHGAP17Q68EM7 881 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 OVOS1Q6IE37 1185 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 RAD9BQ6WBX8 426 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 SPATA31D4Q6ZUB0 917 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 GET4Q7L5D6 327 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 PALB2Q86YC2 1186 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 MSANTD4Q8NCY6 345 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 SLC30A5Q8TAD4 765 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 DDX1Q92499 740 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 RABGGTAQ92696 567 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 CALR3Q96L12 384 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 HEXIM2Q96MH2 286 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 MRPL45Q9BRJ2 306 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 GPR62Q9BZJ7 368 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 ELOVL4Q9GZR5 314 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 MIS12Q9H081 205 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 PDCL3Q9H2J4 239 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 PLEKHA4Q9H4M7 779 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 KCNK12Q9HB15 430 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
UBE3B-205ENST00000535900 CACNG4Q9UBN1 327 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 PIEZO1Q92508 2521 aa11.42□□□□□ -0.58
UBE3B-205ENST00000535900 TRIOO75962 3097 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TGM5O43548 720 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 PLEKP08567 350 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 PNMA6AP0CW24 399 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 SETSIPP0DME0 302 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 CD19P15391 556 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 RPL17P18621 184 aaKnown RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 CDH5P33151 784 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 SLC8A3P57103 927 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TSPY1Q01534 308 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 FMO1Q01740 532 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 MRPL58Q14197 206 aaKnown RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 LIN9Q5TKA1 542 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 CWF19L1Q69YN2 538 aaKnown RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 LCLAT1Q6UWP7 414 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 ANKS3Q6ZW76 656 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 SIX5Q8N196 739 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 B3GALNT2Q8NCR0 500 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TMEM35BQ8NCS4 154 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 HDAC7Q8WUI4 952 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 ELMO3Q96BJ8 720 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TRIM11Q96F44 468 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 VCPIP1Q96JH7 1222 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 PPP1R13BQ96KQ4 1090 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 NOX5Q96PH1 765 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 RHOBTB2Q9BYZ6 727 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 TSGA10Q9BZW7 698 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 CHST7Q9NS84 486 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 DDX43Q9NXZ2 648 aaKnown RBP11.41□□□□□ -0.58
UBE3B-205ENST00000535900 FNIP2Q9P278 1114 aa11.41□□□□□ -0.58
UBE3B-205ENST00000535900 IGSF9Q9P2J2 1179 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms