RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 GRSF1Q12849 480 aaKnown RBP eCLIP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 RUNX3Q13761 415 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 ZNF658Q5TYW1 1059 aaPredicted RBP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 SPEM1Q8N4L4 309 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 CPA6Q8N4T0 437 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 PLEKHO2Q8TD55 490 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 OVCA2Q8WZ82 227 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 ATP2A3Q93084 1043 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 SMARCD1Q96GM5 515 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 CHAMP1Q96JM3 812 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 FAM124BQ9H5Z6 455 aaPredicted RBP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 MAPK8IP1Q9UQF2 711 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 TSC2P49815 1807 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 SLC9A3R1O14745 358 aaPredicted RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 HCRTO43612 131 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ATG13O75143 517 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 AKAP3O75969 853 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ASS1P00966 412 aaKnown RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 CHRNB1P11230 501 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 TCF3P15923 654 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 YWHAQP27348 245 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 IFNAR2P48551 515 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 DLG4P78352 724 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 MTAPQ13126 283 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 FZD5Q13467 585 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 MTF1Q14872 753 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 KRT39Q6A163 491 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ASCL5Q7RTU5 278 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 CRYBG2Q8N1P7 616 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ZFYVE19Q96K21 471 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 SMG9Q9H0W8 520 aaKnown RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 SMYD3Q9H7B4 428 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ARHGAP26Q9UNA1 814 aa12.62□□□□□ -0.39
KNTC1-208ENST00000535410 ZNF840PA6NDX5 716 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 SHISA7A6NL88 538 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 VNN1O95497 513 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 ABL1P00519 1130 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 CDH8P55286 799 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 PNOCQ13519 176 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 FBXO43Q4G163 708 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 SCARA5Q6ZMJ2 495 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
KNTC1-208ENST00000535410 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 ARL14EPQ8N8R7 260 aaPredicted RBP12.61□□□□□ -0.39
KNTC1-208ENST00000535410 OSCP1Q8WVF1 389 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 CYP2S1Q96SQ9 504 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 DPEP3Q9H4B8 488 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 FBXO44Q9H4M3 255 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
KNTC1-208ENST00000535410 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
KNTC1-208ENST00000535410 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 R4GN57 208 aa12.61□□□□□ -0.39
KNTC1-208ENST00000535410 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
KNTC1-208ENST00000535410 PSMA7O14818 248 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
KNTC1-208ENST00000535410 AP1G2O75843 785 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 NFATC1O95644 943 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 CNR2P34972 360 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 GCLMP48507 274 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 NDST1P52848 882 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 MCCD1P59942 119 aaPredicted RBP12.6□□□□□ -0.39
KNTC1-208ENST00000535410 SLC7A9P82251 487 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 TNK2Q07912 1038 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 TAF10Q12962 218 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 PON2Q15165 354 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 ZCWPW2Q504Y3 356 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 ACOT1Q86TX2 421 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
KNTC1-208ENST00000535410 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 TTC16Q8NEE8 873 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 ENGASEQ8NFI3 743 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 TTC8Q8TAM2 541 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 SH3RF2Q8TEC5 729 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 RUBCNQ92622 972 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 FBXO32Q969P5 355 aa12.6□□□□□ -0.39
KNTC1-208ENST00000535410 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms