RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NOL4O94818 638 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 KRT19P08727 400 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM163BP0C2L3 166 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CSH1P0DML2 217 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CSH2P0DML3 217 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ACAT1P24752 427 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CYP2F1P24903 491 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 LMO2P25791 158 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 DDX6P26196 483 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CYP24A1Q07973 514 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CCINQ13939 588 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 PSMD6Q15008 389 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 SNRNP35Q16560 246 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CCDC142Q17RM4 750 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 UAP1L1Q3KQV9 507 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 FOXD4L6Q3SYB3 417 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 PLK5Q496M5 336 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ARHGAP29Q52LW3 1261 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 C19orf48Q6RUI8 117 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 FOXD4L3Q6VB84 417 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 TRAPPC11Q7Z392 1133 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ADGRF2Q8IZF7 708 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CMTM8Q8IZV2 173 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 BPIFB1Q8TDL5 484 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 TRMT2BQ96GJ1 504 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 FUBP3Q96I24 572 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 HPDLQ96IR7 371 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 BLZF1Q9H2G9 400 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM13BQ9NYF5 915 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 GTF3C4Q9UKN8 822 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 ZDHHC9Q9Y397 364 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
CLSTN3-203ENST00000534830 NUP205Q92621 2012 aa10.77□□□□□ -0.68
CLSTN3-203ENST00000534830 ATP2C2O75185 946 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 AKAP3O75969 853 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 RHOBTB1O94844 696 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 STAU1O95793 577 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 TNNC2P02585 160 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 SLFN14P0C7P3 912 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 CSRP1P21291 193 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 WARSP23381 471 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 PCSK1P29120 753 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 MAGEA11P43364 429 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 AFMP43652 599 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 ME1P48163 572 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 PLCB2Q00722 1185 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 MYO1EQ12965 1108 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 DDR2Q16832 855 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 SDHAF4Q5VUM1 108 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 PDZD3Q86UT5 571 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 GRAMD1CQ8IYS0 662 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 XXYLT1Q8NBI6 393 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 STKLD1Q8NE28 680 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 DEFB124Q8NES8 71 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 RIN3Q8TB24 985 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 PLEKHO2Q8TD55 490 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 NOC3LQ8WTT2 800 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 ZFYVE19Q96K21 471 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 CGRRF1Q99675 332 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 FAM83CQ9BQN1 747 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 DUSP15Q9H1R2 295 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 CRTAC1Q9NQ79 661 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 DMAC2Q9NW81 257 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 SERTAD1Q9UHV2 236 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 KLK13Q9UKR3 277 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 CDH9Q9ULB4 789 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 HPSEQ9Y251 543 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 SMG1Q96Q15 3661 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-203ENST00000534830 MYO16Q9Y6X6 1858 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 FAM237AA0A1B0GTK4 181 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 BCLAF3A2AJT9 711 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 EIF4E1BA6NMX2 242 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 DPYSL4O14531 572 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 KHNYNO15037 678 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 DCLK1O15075 740 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 TACC1O75410 805 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 CMA1P23946 247 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 GBP1P32455 592 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 CLDN10P78369 228 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 STK4Q13043 487 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 ZNF268Q14587 947 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 MON1AQ86VX9 555 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 MAB21L3Q8N8X9 362 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 CHFRQ96EP1 664 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms