RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	DUS2	Q9NX74	493 aa	Known RBP	12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	GTF3C4	Q9UKN8	822 aa		12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	ANGPTL2	Q9UKU9	493 aa		12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	NOVA2	Q9UNW9	492 aa	Known RBP	12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	SRPRB	Q9Y5M8	271 aa	Known RBP	12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	CNOT1	A5YKK6	2376 aa	Known RBP	12.37	□□□□□ -0.43
CTNND1-238	ENST00000534647	ANK1	P16157	1881 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	TRAV19	A0A0A6YYK7	116 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	MYMK	A6NI61	221 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	RHOBTB1	O94844	696 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	APBB3	O95704	486 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	FAM163B	P0C2L3	166 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	PDC	P20941	246 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	MPL	P40238	635 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	PDE6C	P51160	858 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	SOWAHA	Q2M3V2	549 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	EML3	Q32P44	896 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	RRAGB	Q5VZM2	374 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	VSTM1	Q6UX27	236 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	C11orf74	Q86VG3	221 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	ZSWIM2	Q8NEG5	633 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	ACD	Q96AP0	544 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	SLC22A12	Q96S37	553 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	RBAK	Q9NYW8	714 aa	Predicted RBP	12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	SIX4	Q9UIU6	781 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	FBXO2	Q9UK22	296 aa	Predicted RBP	12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	ARHGAP26	Q9UNA1	814 aa		12.36	□□□□□ -0.43
CTNND1-238	ENST00000534647	MAP1B	P46821	2468 aa	Known RBP	12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	RALGAPA1	Q6GYQ0	2036 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	GREB1	Q4ZG55	1949 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	DENND4C	Q5VZ89	1909 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	USP24	Q9UPU5	2620 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	BCLAF3	A2AJT9	711 aa	Known RBP	12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	HDC	P19113	662 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	PRSS12	P56730	875 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	MYO1E	Q12965	1108 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	DMC1	Q14565	340 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	MAPRE1	Q15691	268 aa	Known RBP	12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	ELF2	Q15723	593 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	SDHAF4	Q5VUM1	108 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	SCARA3	Q6AZY7	606 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	C4orf50	Q6ZRC1	276 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	OSTM1	Q86WC4	334 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	ADGRF2	Q8IZF7	708 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	RPLP0P6	Q8NHW5	317 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	SAAL1	Q96ER3	474 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	PDE11A	Q9HCR9	933 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	SNX9	Q9Y5X1	595 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	CLIC4	Q9Y696	253 aa		12.35	□□□□□ -0.43
CTNND1-238	ENST00000534647	C2orf78	A6NCI8	922 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	KCNK5	O95279	499 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	GCNT3	O95395	438 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CKM	P06732	381 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	ACAT1	P24752	427 aa	Known RBP	12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	TXLNA	P40222	546 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	PPP3CC	P48454	512 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	IFNAR2	P48551	515 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CASP5	P51878	434 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	SURF1	Q15526	300 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CCDC6	Q16204	474 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	NAIF1	Q69YI7	327 aa	Predicted RBP	12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CCDC73	Q6ZRK6	1079 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	RASSF3	Q86WH2	238 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	SYCP3	Q8IZU3	236 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	GPD1L	Q8N335	351 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	STKLD1	Q8NE28	680 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	SH3RF2	Q8TEC5	729 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	USP33	Q8TEY7	942 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	LRRN4	Q8WUT4	740 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	KBTBD7	Q8WVZ9	684 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	UBXN4	Q92575	508 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CHAMP1	Q96JM3	812 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	HHIP	Q96QV1	700 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CBWD1	Q9BRT8	395 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	TTLL2	Q9BWV7	592 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	LINC00597	Q9H2U6	94 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	INTS13	Q9NVM9	706 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	EHD2	Q9NZN4	543 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	CDH9	Q9ULB4	789 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	WNT6	Q9Y6F9	365 aa		12.34	□□□□□ -0.43
CTNND1-238	ENST00000534647	SPAG17	Q6Q759	2223 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	SDK1	Q7Z5N4	2213 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647		A0A0A0MRY4	1105 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647		K7EQS6	105 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	STX6	O43752	255 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	NFATC1	O95644	943 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	CAVIN2	O95810	425 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	TMEM191B	P0C7N4	346 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	WARS	P23381	471 aa	Known RBP	12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	OPRD1	P41143	372 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	NOP14	P78316	857 aa	Known RBP	12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	SLC7A9	P82251	487 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	KCNB1	Q14721	858 aa		12.33	□□□□□ -0.44
CTNND1-238	ENST00000534647	DUOXA2	Q1HG44	320 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms