RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 CASP1P29466 404 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 GJA4P35212 333 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 EHHADHQ08426 723 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 SRSF5Q13243 272 aaKnown RBP19.7■□□□□ 0.74
CTSB-233ENST00000534636 KNOP1Q1ED39 458 aaKnown RBP19.7■□□□□ 0.74
CTSB-233ENST00000534636 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 RIN3Q8TB24 985 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 SH3RF2Q8TEC5 729 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 SYAP1Q96A49 352 aaPredicted RBP19.7■□□□□ 0.74
CTSB-233ENST00000534636 SLC22A12Q96S37 553 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 MRPL45Q9BRJ2 306 aaKnown RBP19.7■□□□□ 0.74
CTSB-233ENST00000534636 ELOVL4Q9GZR5 314 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 PARD6AQ9NPB6 346 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 C2orf42Q9NWW7 574 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 PCDHA7Q9UN72 937 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 ARHGAP26Q9UNA1 814 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 WNT6Q9Y6F9 365 aa19.7■□□□□ 0.74
CTSB-233ENST00000534636 MED19A0JLT2 244 aaPredicted RBP19.69■□□□□ 0.74
CTSB-233ENST00000534636 FOXD2O60548 495 aaPredicted RBP19.69■□□□□ 0.74
CTSB-233ENST00000534636 NFATC1O95644 943 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 EGFP01133 1207 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 FAM163BP0C2L3 166 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 CCDC192P0DO97 292 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 ATICP31939 592 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 PPP3CCP48454 512 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 BIRC3Q13489 604 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 C12orf56Q8IXR9 622 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 CCDC26Q8TAB7 109 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 CD101Q93033 1021 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 RTKNQ9BST9 563 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 EXOC1Q9NV70 894 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 GCNT4Q9P109 453 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 NXF1Q9UBU9 619 aaKnown RBP19.69■□□□□ 0.74
CTSB-233ENST00000534636 ATP8B3O60423 1300 aa19.69■□□□□ 0.74
CTSB-233ENST00000534636 MYH10P35580 1976 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 CCDC163A0A0D9SF12 145 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 A8MXQ7 604 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 F8VP50 259 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 RPP40O75818 363 aaKnown RBP19.68■□□□□ 0.74
CTSB-233ENST00000534636 STAU1O95793 577 aaKnown RBP19.68■□□□□ 0.74
CTSB-233ENST00000534636 CST3P01034 146 aaPredicted RBP19.68■□□□□ 0.74
CTSB-233ENST00000534636 TCF3P15923 654 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 TGM1P22735 817 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 GALK1P51570 392 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 AP3M2P53677 418 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 NOP14P78316 857 aaKnown RBP19.68■□□□□ 0.74
CTSB-233ENST00000534636 CUL4BQ13620 913 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 EML3Q32P44 896 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 NETO1Q8TDF5 533 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 ACDQ96AP0 544 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 CHFRQ96EP1 664 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 C8orf48Q96LL4 319 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 SLITRK1Q96PX8 696 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 SEMA4GQ9NTN9 838 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 MYO16Q9Y6X6 1858 aa19.68■□□□□ 0.74
CTSB-233ENST00000534636 ABL1P00519 1130 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 PTPN1P18031 435 aaKnown RBP19.67■□□□□ 0.74
CTSB-233ENST00000534636 ATXN1P54253 815 aaKnown RBP19.67■□□□□ 0.74
CTSB-233ENST00000534636 MYL6P60660 151 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 PSMD2Q13200 908 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 CSRP2Q16527 193 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 ZNF699Q32M78 642 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 TDRD10Q5VZ19 366 aaKnown RBP19.67■□□□□ 0.74
CTSB-233ENST00000534636 PKN3Q6P5Z2 889 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 PRR23CQ6ZRP0 262 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 CAMKK1Q8N5S9 505 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 FAM160A2Q8N612 972 aaPredicted RBP19.67■□□□□ 0.74
CTSB-233ENST00000534636 B3GALNT2Q8NCR0 500 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 GAB3Q8WWW8 586 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 TTLL2Q9BWV7 592 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.67■□□□□ 0.74
CTSB-233ENST00000534636 KIAA1549LQ6ZVL6 1849 aa19.67■□□□□ 0.74
CTSB-233ENST00000534636 SLFN14P0C7P3 912 aa19.66■□□□□ 0.74
CTSB-233ENST00000534636 PXNP49023 591 aaPredicted RBP19.66■□□□□ 0.74
CTSB-233ENST00000534636 USP46P62068 366 aa19.66■□□□□ 0.74
CTSB-233ENST00000534636 IFRD2Q12894 506 aaPredicted RBP19.66■□□□□ 0.74
CTSB-233ENST00000534636 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
CTSB-233ENST00000534636 RPLP0P6Q8NHW5 317 aa19.66■□□□□ 0.74
CTSB-233ENST00000534636 DPEP3Q9H4B8 488 aa19.66■□□□□ 0.74
CTSB-233ENST00000534636 EML5Q05BV3 1969 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 ZNF840PA6NDX5 716 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 P4HA1P13674 534 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 DNM1Q05193 864 aaKnown RBP19.65■□□□□ 0.74
CTSB-233ENST00000534636 ZNF667Q5HYK9 610 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 GRAMD1CQ8IYS0 662 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 TNIP3Q96KP6 325 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 HHIPQ96QV1 700 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 SERTAD1Q9UHV2 236 aa19.65■□□□□ 0.74
CTSB-233ENST00000534636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.64■□□□□ 0.73
CTSB-233ENST00000534636 LEFTY2O00292 366 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 SLC9A3R1O14745 358 aaPredicted RBP19.64■□□□□ 0.73
CTSB-233ENST00000534636 AKAP3O75969 853 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 RTN3O95197 1032 aaPredicted RBP19.64■□□□□ 0.73
CTSB-233ENST00000534636 CASP4P49662 377 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 SLC7A9P82251 487 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 TAF10Q12962 218 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 NCOA4Q13772 614 aa19.64■□□□□ 0.73
CTSB-233ENST00000534636 NAIF1Q69YI7 327 aaPredicted RBP19.64■□□□□ 0.73
CTSB-233ENST00000534636 SCARA5Q6ZMJ2 495 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms