RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 DENND5BQ6ZUT9 1274 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 NEK11Q8NG66 645 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 ITFG1Q8TB96 612 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 TCEAL4Q96EI5 215 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 TRMT2BQ96GJ1 504 aaKnown RBP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 KCNK16Q96T55 309 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 NAA15Q9BXJ9 866 aaKnown RBP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.61■■□□□ 1.69
SIPA1-210ENST00000534406 EHD2Q9NZN4 543 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 HESX1Q9UBX0 185 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 TSPAN16Q9UKR8 245 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 VCANP13611 3396 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 NCOR1O75376 2440 aa25.61■■□□□ 1.69
SIPA1-210ENST00000534406 C2CD4DB7Z1M9 353 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 CEBPBP17676 345 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 CDC25CP30307 473 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 CCR2P41597 374 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 DRAP1Q14919 205 aaPredicted RBP25.6■■□□□ 1.69
SIPA1-210ENST00000534406 ZMIZ2Q8NF64 920 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 ING5Q8WYH8 240 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 TFAP2BQ92481 460 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 MYRFLQ96LU7 910 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 MYADMQ96S97 322 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 DUSP16Q9BY84 665 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 CDH7Q9ULB5 785 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 ZNF638Q14966 1978 aaKnown RBP25.6■■□□□ 1.69
SIPA1-210ENST00000534406 OBSL1O75147 1896 aa25.6■■□□□ 1.69
SIPA1-210ENST00000534406 LOC730098B7Z3J9 87 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 EPHB6O15197 1021 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 BEST1O76090 585 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 MICAL2O94851 1124 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 GABRR2P28476 465 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 BCAT1P54687 386 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 SLC8A3P57103 927 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 POLR2FP61218 127 aaKnown RBP25.59■■□□□ 1.69
SIPA1-210ENST00000534406 NPAS3Q8IXF0 933 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 ANKRD52Q8NB46 1076 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 SHKBP1Q8TBC3 707 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 FGF13Q92913 245 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 NAP1L5Q96NT1 182 aaPredicted RBP25.59■■□□□ 1.69
SIPA1-210ENST00000534406 TTLL2Q9BWV7 592 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 IL21Q9HBE4 155 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 PNPLA8Q9NP80 782 aa25.59■■□□□ 1.69
SIPA1-210ENST00000534406 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.59■■□□□ 1.69
SIPA1-210ENST00000534406 TTC28Q96AY4 2481 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 A0A1W2PRU2 124 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 F8VZ95 297 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 RTN3O95197 1032 aaPredicted RBP25.58■■□□□ 1.69
SIPA1-210ENST00000534406 CALCAP01258 141 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 GNA15P30679 374 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 SLC5A3P53794 718 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 UBASH3AP57075 661 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 LCLAT1Q6UWP7 414 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 GAREM2Q75VX8 874 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 NUP93Q8N1F7 819 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 NECAB3Q96P71 396 aaPredicted RBP25.58■■□□□ 1.69
SIPA1-210ENST00000534406 UHRF1Q96T88 793 aaPredicted RBP25.58■■□□□ 1.69
SIPA1-210ENST00000534406 STK33Q9BYT3 514 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 GPR88Q9GZN0 384 aa25.58■■□□□ 1.69
SIPA1-210ENST00000534406 ZFP37Q9Y6Q3 630 aaPredicted RBP25.58■■□□□ 1.69
SIPA1-210ENST00000534406 DENND4CQ5VZ89 1909 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 A0A1W2PQC6 194 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 C19orf67A6NJJ6 358 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 M0QYV0 167 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 FOXN3O00409 490 aaPredicted RBP25.57■■□□□ 1.68
SIPA1-210ENST00000534406 CYP26A1O43174 497 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 THAP12O43422 761 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 MOSPD3O75425 235 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 PNMA6AP0CW24 399 aaPredicted RBP25.57■■□□□ 1.68
SIPA1-210ENST00000534406 GJA1P17302 382 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 USP46P62068 366 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 BST2Q10589 180 aaKnown RBP25.57■■□□□ 1.68
SIPA1-210ENST00000534406 TTC30AQ86WT1 665 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 FAM71AQ8IYT1 594 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 PLCD3Q8N3E9 789 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 ZSWIM1Q9BR11 485 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 ATXN3LQ9H3M9 355 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 NLRC4Q9NPP4 1024 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 IFNKQ9P0W0 207 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 EPS15L1Q9UBC2 864 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 MYO16Q9Y6X6 1858 aa25.57■■□□□ 1.68
SIPA1-210ENST00000534406 NRG2O14511 850 aaPredicted RBP25.56■■□□□ 1.68
SIPA1-210ENST00000534406 TNFRSF10BO14763 440 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 MED7O43513 233 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 SETSIPP0DME0 302 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 SSTR3P32745 418 aaPredicted RBP25.56■■□□□ 1.68
SIPA1-210ENST00000534406 PTK2Q05397 1052 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 IFRD2Q12894 506 aaPredicted RBP25.56■■□□□ 1.68
SIPA1-210ENST00000534406 NR1I3Q14994 352 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 TEAD2Q15562 447 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 CNGA2Q16280 664 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 ARHGAP15Q53QZ3 475 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 ZDHHC14Q8IZN3 488 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 SPAG5Q96R06 1193 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 SLITRK6Q9H5Y7 841 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 GDE1Q9NZC3 331 aa25.56■■□□□ 1.68
SIPA1-210ENST00000534406 HHLA1C9JL84 531 aa25.55■■□□□ 1.68
SIPA1-210ENST00000534406 TPM3P06753 285 aa25.55■■□□□ 1.68
SIPA1-210ENST00000534406 BPIFB4P59827 614 aa25.55■■□□□ 1.68
SIPA1-210ENST00000534406 PTPN21Q16825 1174 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms