RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CYP1A2P05177 515 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 VCLP18206 1134 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 MFAP3P55082 362 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 SNRPFP62306 86 aaKnown RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 STAT4Q14765 748 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 LLGL1Q15334 1064 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 SIX1Q15475 284 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 ZNF362Q5T0B9 420 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 PATL1Q86TB9 770 aaKnown RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 TRABD2AQ86V40 505 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 DDX1Q92499 740 aaKnown RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 FAM161BQ96MY7 647 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 TTC25Q96NG3 672 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 PXMP2Q9NR77 195 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 ANKFY1Q9P2R3 1169 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 CROTQ9UKG9 612 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 SMG5Q9UPR3 1016 aaKnown RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 NUB1Q9Y5A7 615 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 NR2E3Q9Y5X4 410 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 WDR64B1ANS9 1081 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 SPAG7O75391 227 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 ESRRAP11474 423 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-210ENST00000534405 PDK3Q15120 406 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 RIPOR1Q6ZS17 1223 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMPD1-210ENST00000534405 LPAR1Q92633 364 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 TTC1Q99614 292 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 WNT8AQ9H1J5 351 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 PTPN22Q9Y2R2 807 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 FADS3Q9Y5Q0 445 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.03■□□□□ 0.8
SMPD1-210ENST00000534405 EGFRP00533 1210 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 NAT1P18440 290 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 KCNJ1P48048 391 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 GPC3P51654 580 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 CXCL9Q07325 125 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 MSLNQ13421 630 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-210ENST00000534405 SEL1L2Q5TEA6 688 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 THOC7Q6I9Y2 204 aaKnown RBP20.03■□□□□ 0.8
SMPD1-210ENST00000534405 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 SKA1Q96BD8 255 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 TEPSINQ96N21 525 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 PANX3Q96QZ0 392 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 CCDC77Q9BR77 488 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 OSBPL8Q9BZF1 889 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 TMEM8AQ9HCN3 771 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 ANKEF1Q9NU02 776 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 HEY2Q9UBP5 337 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 PPM1HQ9ULR3 514 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 HEY1Q9Y5J3 304 aa20.03■□□□□ 0.8
SMPD1-210ENST00000534405 SH3PXD2BA1X283 911 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 SPOPO43791 374 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 BAG2O95816 211 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 ITIH2P19823 946 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 JAK3P52333 1124 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 LPIN1Q14693 890 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 SFT2D3Q587I9 215 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 C6orf163Q5TEZ5 329 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 CCDC62Q6P9F0 684 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 SLC13A5Q86YT5 568 aaPredicted RBP20.02■□□□□ 0.8
SMPD1-210ENST00000534405 ZNF75CPQ92670 426 aaPredicted RBP20.02■□□□□ 0.8
SMPD1-210ENST00000534405 TCHPQ9BT92 498 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 PI4K2AQ9BTU6 479 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 ZNHIT2Q9UHR6 403 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 GTF3C4Q9UKN8 822 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
SMPD1-210ENST00000534405 FKBP6O75344 327 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 USP1O94782 785 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 RELAQ04206 551 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 TMED2Q15363 201 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 NADK2Q4G0N4 442 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 ANKRD20A4Q4UJ75 823 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 RNF207Q6ZRF8 634 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 RFX8Q6ZV50 586 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 NANOGNBQ7Z5D8 188 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 C12orf50Q8NA57 414 aaPredicted RBP20.02■□□□□ 0.79
SMPD1-210ENST00000534405 ZFP28Q8NHY6 868 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 SLCO2A1Q92959 643 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 KMT5AQ9NQR1 393 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 RAB20Q9NX57 234 aa20.02■□□□□ 0.79
SMPD1-210ENST00000534405 TNS1Q9HBL0 1735 aaKnown RBP20.01■□□□□ 0.79
SMPD1-210ENST00000534405 ARHGAP10A1A4S6 786 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 DMP1Q13316 513 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-210ENST00000534405 MTMR2Q13614 643 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 FAM91A1Q658Y4 838 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 SV2AQ7L0J3 742 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 METTL25Q8N6Q8 603 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 FBXL13Q8NEE6 735 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 RFWD2Q8NHY2 731 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 CCDC110Q8TBZ0 833 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 FAM172AQ8WUF8 416 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 MFSD14AQ96MC6 490 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 FBXL18Q96ME1 805 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 NT5C1BQ96P26 610 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 HESX1Q9UBX0 185 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 EXOC7Q9UPT5 735 aa20.01■□□□□ 0.79
SMPD1-210ENST00000534405 MATN2O00339 956 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms