RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TRIM66O15016 1216 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.471e-5■□□□□ 8.6
CAPRIN1-216ENST00000534042 DLATP10515 647 aaKnown RBP18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 HOXD13P35453 343 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 MPLP40238 635 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 NASPP49321 788 aaPredicted RBP18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 USP46P62068 366 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 AMPD3Q01432 767 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 ELF2Q15723 593 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 PLA2G2CQ5R387 149 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 RDH13Q8NBN7 331 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 MYCBPAPQ8TBZ2 947 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 PCED1BQ96HM7 432 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 TRIM9Q9C026 710 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 CUEDC2Q9H467 287 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 SMOC1Q9H4F8 434 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 VPS45Q9NRW7 570 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 RXFP3Q9NSD7 469 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 KBTBD4Q9NVX7 518 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 EBF1Q9UH73 591 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 MYO18AQ92614 2054 aaKnown RBP18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 NUP205Q92621 2012 aa18.01■□□□□ 0.47
CAPRIN1-216ENST00000534042 THADAQ6YHU6 1953 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 GON4LQ3T8J9 2241 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 SPTLC2O15270 562 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 STX6O43752 255 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 RHOBTB1O94844 696 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 TNNI1P19237 187 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 GNL1P36915 607 aaPredicted RBP18■□□□□ 0.47
CAPRIN1-216ENST00000534042 ASIC1P78348 528 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 E2F4Q16254 413 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 SNRNP35Q16560 246 aaKnown RBP18■□□□□ 0.47
CAPRIN1-216ENST00000534042 MDH1BQ5I0G3 518 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 STPG1Q5TH74 334 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 HS2ST1Q7LGA3 356 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 OR6B3Q8NGW1 331 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 ZNF507Q8TCN5 953 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 MRPL45Q9BRJ2 306 aaKnown RBP18■□□□□ 0.47
CAPRIN1-216ENST00000534042 TTLL2Q9BWV7 592 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 DUSP15Q9H1R2 295 aaPredicted RBP18■□□□□ 0.47
CAPRIN1-216ENST00000534042 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 CHD8Q9HCK8 2581 aa18■□□□□ 0.47
CAPRIN1-216ENST00000534042 F8VP50 259 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 LEFTY2O00292 366 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 TM4SF5O14894 197 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 TACC1O75410 805 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 PPP3CCP48454 512 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 DGKEP52429 567 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 FAM26FQ5R3K3 315 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 EPM2AIP1Q7L775 607 aaPredicted RBP17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 TSTD1Q8NFU3 115 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 USP33Q8TEY7 942 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 DHX58Q96C10 678 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 C8orf48Q96LL4 319 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 CGRRF1Q99675 332 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 AGPAT3Q9NRZ7 376 aa17.99■□□□□ 0.47
CAPRIN1-216ENST00000534042 ZNF840PA6NDX5 716 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 DCLK1O15075 740 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 CLIC2O15247 247 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 TGFB1I1O43294 461 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 PPP6R2O75170 966 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 KRT37O76014 449 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 ABL1P00519 1130 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 GBP1P32455 592 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 OPRD1P41143 372 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 CYP2J2P51589 502 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 TNNC1P63316 161 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 NOP14P78316 857 aaKnown RBP17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 SLC7A9P82251 487 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 ZXDBP98169 803 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 CREB5Q02930 508 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 PSMD6Q15008 389 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 WDR72Q3MJ13 1102 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 C2orf27AQ580R0 203 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 TDRD10Q5VZ19 366 aaKnown RBP17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 KIAA1958Q8N8K9 716 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 CCDC127Q96BQ5 260 aa17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 ZNF396Q96N95 335 aaPredicted RBP17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 TFIP11Q9UBB9 837 aaKnown RBP17.98■□□□□ 0.47
CAPRIN1-216ENST00000534042 K7EQS6 105 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 SLC9A3R1O14745 358 aaPredicted RBP17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 PTPN1P18031 435 aaKnown RBP17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 SEC13P55735 322 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 SNRPFP62306 86 aaKnown RBP17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 CYP24A1Q07973 514 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 TAF10Q12962 218 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 TRPC3Q13507 836 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 USP39Q53GS9 565 aaKnown RBP17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 N4BP2L1Q5TBK1 243 aaPredicted RBP17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 RNF43Q68DV7 783 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 CNNM4Q6P4Q7 775 aa17.97■□□□□ 0.47
CAPRIN1-216ENST00000534042 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms