RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 SNX29Q8TEQ0 813 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 TRMT2BQ96GJ1 504 aaKnown RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 MYRFLQ96LU7 910 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 RPF1Q9H9Y2 349 aaKnown RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 BCCIPQ9P287 314 aaKnown RBP eCLIP13.24□□□□□ -0.29
SVIP-205ENST00000533774 HCN2Q9UL51 889 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 MUC22E2RYF6 1773 aaPredicted RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 MYLKQ15746 1914 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 OGTO15294 1046 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 CBFA2T3O75081 653 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 NFATC1O95644 943 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 C7P10643 843 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 GUCY2CP25092 1073 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 IL17AQ16552 155 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 TOGARAM2Q6ZUX3 1019 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 METTL23Q86XA0 190 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 NAXDQ8IW45 347 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 DCP1BQ8IZD4 617 aaKnown RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 PKMYT1Q99640 499 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 POLMQ9NP87 494 aaPredicted RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 DSEQ9UL01 958 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 ARHGAP26Q9UNA1 814 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 ZNF462Q96JM2 2506 aa13.23□□□□□ -0.29
SVIP-205ENST00000533774 TP53BP1Q12888 1972 aaPredicted RBP13.23□□□□□ -0.29
SVIP-205ENST00000533774 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 LEFTY2O00292 366 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 AP5Z1O43299 807 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 HCRTO43612 131 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 KAT7O95251 611 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 GABRG2P18507 467 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 DPP6P42658 865 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 TAF6P49848 677 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 KDSRQ06136 332 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 TMEM132DQ14C87 1099 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 DHCR24Q15392 516 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 TTC38Q5R3I4 469 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 ADGRG2Q8IZP9 1017 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 PGBD3Q8N328 593 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 BICD1Q96G01 975 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 PNKPQ96T60 521 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 CD93Q9NPY3 652 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 TOR4AQ9NXH8 423 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
SVIP-205ENST00000533774 DKK4Q9UBT3 224 aa13.22□□□□□ -0.29
SVIP-205ENST00000533774 NUMA1Q14980 2115 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 A0A0B4J269 797 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 IGHV1OR15-9A0A0B4J2B8 117 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 HDCP19113 662 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 PAX3P23760 479 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.29
SVIP-205ENST00000533774 NCKAP1LP55160 1127 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
SVIP-205ENST00000533774 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 SLC14A1Q13336 389 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.29
SVIP-205ENST00000533774 PDIA5Q14554 519 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 EOGTQ5NDL2 527 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
SVIP-205ENST00000533774 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
SVIP-205ENST00000533774 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 RNF38Q9H0F5 515 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 DPP3Q9NY33 737 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
SVIP-205ENST00000533774 MYO18BQ8IUG5 2567 aa13.21□□□□□ -0.3
SVIP-205ENST00000533774 KPNA7A9QM74 516 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 TISP43B9A030 160 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
SVIP-205ENST00000533774 PIGRP01833 764 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 APODP05090 189 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 ACOT2P49753 483 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 LIG4P49917 911 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 SMTNP53814 917 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 USP46P62068 366 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 C19orf57Q0VDD7 668 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
SVIP-205ENST00000533774 KCNB1Q14721 858 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 HSF5Q4G112 596 aaPredicted RBP13.2□□□□□ -0.3
SVIP-205ENST00000533774 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 TMPRSS7Q7RTY8 843 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 GLRX5Q86SX6 157 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms