RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CTC1Q2NKJ3 1217 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 TDRD12Q587J7 1177 aaKnown RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 SYCE2Q6PIF2 218 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 TMEM184AQ6ZMB5 413 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 ITIH5Q86UX2 942 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 FEZF2Q8TBJ5 459 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 NUCKS1Q9H1E3 243 aaKnown RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 ZNHIT6Q9NWK9 470 aaKnown RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 CD207Q9UJ71 328 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 CEP83Q9Y592 693 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 SLC38A8A6NNN8 435 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 AKR1B15C9JRZ8 316 aaPredicted RBP18.45■□□□□ 0.54
NXF1-216ENST00000533499 PIK3R2O00459 728 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 MMEP08473 750 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 MRE11P49959 708 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 KLHL30Q0D2K2 578 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 GRASPQ7Z6J2 395 aaPredicted RBP18.45■□□□□ 0.54
NXF1-216ENST00000533499 DNAJB7Q7Z6W7 309 aaPredicted RBP18.45■□□□□ 0.54
NXF1-216ENST00000533499 EPS8L1Q8TE68 723 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 C8orf48Q96LL4 319 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 PRDM6Q9NQX0 595 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 HCFC1R1Q9NWW0 138 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 CDH22Q9UJ99 828 aa18.45■□□□□ 0.54
NXF1-216ENST00000533499 TULP2O00295 520 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 MFAP3LO75121 409 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 SETSIPP0DME0 302 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 PTPN2P17706 415 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 TNFAIP3P21580 790 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 NTHL1P78549 312 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 ATAT1Q5SQI0 421 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
NXF1-216ENST00000533499 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 RTL10Q7L3V2 364 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 PIGZQ86VD9 579 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 CNGA4Q8IV77 575 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 HS6ST3Q8IZP7 471 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 ZMIZ2Q8NF64 920 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 OR8K1Q8NGG5 319 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 ZNF707Q96C28 371 aaPredicted RBP18.44■□□□□ 0.54
NXF1-216ENST00000533499 AGPAT1Q99943 283 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 HAUS4Q9H6D7 363 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 LRRC4Q9HBW1 653 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 ASAH2Q9NR71 780 aa18.44■□□□□ 0.54
NXF1-216ENST00000533499 CSH1P0DML2 217 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 CSH2P0DML3 217 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 LCP1P13796 627 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 CDC25BP30305 580 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 HOXA9P31269 272 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 CDR2Q01850 454 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 TBX2Q13207 712 aaPredicted RBP18.43■□□□□ 0.54
NXF1-216ENST00000533499 CYP4A22Q5TCH4 519 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 IRF2BP2Q7Z5L9 587 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 NUP93Q8N1F7 819 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 C1orf131Q8NDD1 294 aaKnown RBP18.43■□□□□ 0.54
NXF1-216ENST00000533499 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.43■□□□□ 0.54
NXF1-216ENST00000533499 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 AIPL1Q9NZN9 384 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 NOCTQ9UK39 431 aaKnown RBP18.43■□□□□ 0.54
NXF1-216ENST00000533499 ASB3Q9Y575 518 aa18.43■□□□□ 0.54
NXF1-216ENST00000533499 DOCK6Q96HP0 2047 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 XPO1O14980 1071 aaKnown RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 ABL1P00519 1130 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 CHRNB2P17787 502 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 SLC5A3P53794 718 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 USP46P62068 366 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 ITIH3Q06033 890 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 COL19A1Q14993 1142 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 PABPC1LQ4VXU2 614 aaKnown RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 SMYD5Q6GMV2 418 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 PDZD4Q76G19 769 aaPredicted RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 GPRIN1Q7Z2K8 1008 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 GPR149Q86SP6 731 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 ZNF677Q86XU0 584 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 SIX6OS1Q8N1H7 587 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 TMEM35BQ8NCS4 154 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 CMASQ8NFW8 434 aaPredicted RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 SCAMP5Q8TAC9 235 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 PSMG2Q969U7 264 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 SPATA17Q96L03 361 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 RIPOR3Q96MK2 946 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 NOX5Q96PH1 765 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 GCNAQ96QF7 691 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 ADAM7Q9H2U9 754 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 CSNK1G1Q9HCP0 422 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 DNMT3BQ9UBC3 853 aaKnown RBP18.42■□□□□ 0.54
NXF1-216ENST00000533499 PCDHGC3Q9UN70 934 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 COG5Q9UP83 839 aa18.42■□□□□ 0.54
NXF1-216ENST00000533499 RTN3O95197 1032 aaPredicted RBP18.41■□□□□ 0.54
NXF1-216ENST00000533499 SERPING1P05155 500 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 YWHAQP27348 245 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 TKTL1P51854 596 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 FMO1Q01740 532 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 ADIGQ0VDE8 80 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 NAA35Q5VZE5 725 aa18.41■□□□□ 0.54
NXF1-216ENST00000533499 PMF1Q6P1K2 205 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms