RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SERAC1Q96JX3 654 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 ZWILCHQ9H900 591 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 LRCH1Q9Y2L9 728 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 MAFBQ9Y5Q3 323 aaPredicted RBP17.38■□□□□ 0.37
CTSB-228ENST00000533455 LCTP09848 1927 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 APOC4-APOC2K7ER74 178 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 FAM189A1O60320 539 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 PIAS1O75925 651 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 PSMG1O95456 288 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 APOC2P02655 101 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 CALRP27797 417 aaKnown RBP17.38■□□□□ 0.37
CTSB-228ENST00000533455 POLR2BP30876 1174 aaKnown RBP17.38■□□□□ 0.37
CTSB-228ENST00000533455 MYL6P60660 151 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 CCDC6Q16204 474 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 JOSD2Q8TAC2 188 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 YIPF3Q9GZM5 350 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 SYNCQ9H7C4 482 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 PNPLA8Q9NP80 782 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 CHMP2BQ9UQN3 213 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 PDHA1P08559 390 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 KRT3P12035 628 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 ZBTB16Q05516 673 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 SLC34A1Q06495 639 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 KPNB1Q14974 876 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 SMTNL2Q2TAL5 461 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 PTPN20Q4JDL3 420 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 SNX30Q5VWJ9 437 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 RINLQ6ZS11 566 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 PRR11Q96HE9 360 aaPredicted RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 OXNAD1Q96HP4 312 aaPredicted RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 FAM111AQ96PZ2 611 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 LHX5Q9H2C1 402 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ALG13Q9NP73 1137 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 FBXO6Q9NRD1 293 aaPredicted RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 SPATS2LQ9NUQ6 558 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 TAS2R1Q9NYW7 299 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 TEX264Q9Y6I9 313 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 SSC5DA1L4H1 1573 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 LOC285556D6RIA3 1793 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 TCRBV9S1A1TA0A576 114 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 KRT36O76013 467 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 FESP07332 822 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 RARBP10826 455 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 BGNP21810 368 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ELK3P41970 407 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 EIF3EP60228 445 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 YWHAEP62258 255 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 FAAP100Q0VG06 881 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 MTMR2Q13614 643 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 DPYSL3Q14195 570 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 GNPTABQ3T906 1256 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 SEZ6Q53EL9 994 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 DENND1BQ6P3S1 775 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 POTEAQ6S8J7 498 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 NRG4Q8WWG1 115 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 MCUR1Q96AQ8 359 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 MTMR12Q9C0I1 747 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 ARHGEF4Q9NR80 690 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 STX18Q9P2W9 335 aaKnown RBP17.37■□□□□ 0.37
CTSB-228ENST00000533455 IKBKGQ9Y6K9 419 aa17.37■□□□□ 0.37
CTSB-228ENST00000533455 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
CTSB-228ENST00000533455 A8MXQ7 604 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 FCHO1O14526 889 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 MCF2LO15068 1137 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 AHCYL1O43865 530 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 INHBAP08476 426 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 ESRRAP11474 423 aaPredicted RBP17.36■□□□□ 0.37
CTSB-228ENST00000533455 PEX19P40855 299 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 TNFSF9P41273 254 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 SERPINB4P48594 390 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 TUBP50607 506 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 RAP1GDS1P52306 607 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 OAZ1P54368 228 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 KCNJ11Q14654 390 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 ZRSR2Q15696 482 aaKnown RBP17.36■□□□□ 0.37
CTSB-228ENST00000533455 C11orf91Q3C1V1 193 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 ZNF394Q53GI3 561 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 KCNT1Q5JUK3 1230 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 LRRC74BQ6ZQY2 392 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 RFX6Q8HWS3 928 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 KIAA0319LQ8IZA0 1049 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 VPS52Q8N1B4 723 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 FAM71DQ8N9W8 422 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 CMASQ8NFW8 434 aaPredicted RBP17.36■□□□□ 0.37
CTSB-228ENST00000533455 TTC17Q96AE7 1141 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 SYT15Q9BQS2 421 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 ASB3Q9Y575 518 aa17.36■□□□□ 0.37
CTSB-228ENST00000533455 ANK1P16157 1881 aa17.35■□□□□ 0.37
CTSB-228ENST00000533455 KBTBD13C9JR72 458 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms