RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 EPHB2P29323 1055 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 HASPINQ8TF76 798 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 BHMTQ93088 406 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 NDNQ99608 321 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 ANLNQ9NQW6 1124 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 DPP3Q9NY33 737 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 NAALADL1Q9UQQ1 740 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 SYF2O95926 243 aaKnown RBP12.73□□□□□ -0.37
BDNF-218ENST00000533246 CPB1P15086 417 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 KCNA3P22001 575 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 CCND1P24385 295 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 GRIK1P39086 918 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 STX3Q13277 289 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 CLEC16AQ2KHT3 1053 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 TFDP3Q5H9I0 405 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 FAM117BQ6P1L5 589 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 ALG3Q92685 438 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
BDNF-218ENST00000533246 TUBB6Q9BUF5 446 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 CNGB3Q9NQW8 809 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 SETD4Q9NVD3 440 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
BDNF-218ENST00000533246 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
BDNF-218ENST00000533246 OPLAHO14841 1288 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PFDN6O15212 129 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PDE5AO76074 875 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 DDHD2O94830 711 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 TTC4O95801 387 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 SHBGP04278 402 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 CYP2C8P10632 490 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 SKOR1P84550 965 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 YWHAHQ04917 246 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 UGCGQ16739 394 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 KLC3Q6P597 504 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 MOB2Q70IA6 237 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 RDM1Q8NG50 284 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 CAVIN3Q969G5 261 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 B2RBV5 119 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 XPAP23025 273 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 HSP90AA5PQ58FG0 334 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 TTMPQ5BVD1 217 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 BRD8Q9H0E9 1235 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PLEKHA5Q9HAU0 1116 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 DNPEPQ9ULA0 475 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 M0QYT0 321 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 NDUFB5O43674 189 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 AKAP5P24588 427 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 SCUBE3Q8IX30 993 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 FAM172AQ8WUF8 416 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 DDIT4Q9NX09 232 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 TUBA8Q9NY65 449 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 A0A0A6YYK5 440 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 ASAP2O43150 1006 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PMPCBO75439 489 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 ETS1P14921 441 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 TCN1P20061 433 aaPredicted RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
BDNF-218ENST00000533246 DSG3P32926 999 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 SCTRP47872 440 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 KRT80Q6KB66 452 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 PPIL6Q8IXY8 311 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 RMDN1Q96DB5 314 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 CGRRF1Q99675 332 aa12.72□□□□□ -0.37
BDNF-218ENST00000533246 FER1L4A9Z1Z3 1794 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 H3BRB1 525 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 UBOX5O94941 541 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 SLC25A27O95847 323 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 HSD17B4P51659 736 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
BDNF-218ENST00000533246 CENPCQ03188 943 aa12.71□□□□□ -0.37
BDNF-218ENST00000533246 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.37
BDNF-218ENST00000533246 TBL3Q12788 808 aaKnown RBP12.71□□□□□ -0.37
BDNF-218ENST00000533246 NFIL3Q16649 462 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms