RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LILRB5O75023 590 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 VNN1O95497 513 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 CKMP06732 381 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 DLG4P78352 724 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 TNK2Q07912 1038 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 TXNDC11Q6PKC3 985 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 INTS8Q75QN2 995 aaKnown RBP24.97■■□□□ 1.59
SMPD1-209ENST00000533196 DPEP3Q9H4B8 488 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 TRPC7Q9HCX4 862 aa24.97■■□□□ 1.59
SMPD1-209ENST00000533196 F8VP50 259 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 CLSTN1O94985 981 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 PAPSS2O95340 614 aaPredicted RBP24.96■■□□□ 1.59
SMPD1-209ENST00000533196 NR2F2P24468 414 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 USP4Q13107 963 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 MTF1Q14872 753 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 ZNF77Q15935 545 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 SV2AQ7L0J3 742 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 KIAA1958Q8N8K9 716 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 TTC8Q8TAM2 541 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 SMYD3Q9H7B4 428 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 HPS4Q9NQG7 708 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 ARHGAP26Q9UNA1 814 aa24.96■■□□□ 1.59
SMPD1-209ENST00000533196 TDGF1P13385 188 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 HDCP19113 662 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 CXCL12P48061 93 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 VAMP7P51809 220 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 CCINQ13939 588 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 PON2Q15165 354 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 SUMF1Q8NBK3 374 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 EXOC4Q96A65 974 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 B3GNT5Q9BYG0 378 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 EBF3Q9H4W6 596 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 GDPD2Q9HCC8 539 aa24.95■■□□□ 1.58
SMPD1-209ENST00000533196 GOLGA6L4A6NEF3 574 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 ASS1P00966 412 aaKnown RBP24.94■■□□□ 1.58
SMPD1-209ENST00000533196 KRT13P13646 458 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 MCCD1P59942 119 aaPredicted RBP24.94■■□□□ 1.58
SMPD1-209ENST00000533196 USP46P62068 366 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 TSSK4Q6SA08 328 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 UNC93AQ86WB7 457 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 ARL14EPQ8N8R7 260 aaPredicted RBP24.94■■□□□ 1.58
SMPD1-209ENST00000533196 OSCP1Q8WVF1 389 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 RUBCNQ92622 972 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 SLITRK1Q96PX8 696 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 SLC22A12Q96S37 553 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 CYP2S1Q96SQ9 504 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 ZNF518BQ9C0D4 1074 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 MYH10P35580 1976 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 CFAP54Q96N23 3096 aa24.94■■□□□ 1.58
SMPD1-209ENST00000533196 SPTBN4Q9H254 2564 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 C2orf78A6NCI8 922 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 TRDMT1O14717 391 aaKnown RBP24.93■■□□□ 1.58
SMPD1-209ENST00000533196 AKAP3O75969 853 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 RTN3O95197 1032 aaPredicted RBP24.93■■□□□ 1.58
SMPD1-209ENST00000533196 TRIM21P19474 475 aaKnown RBP24.93■■□□□ 1.58
SMPD1-209ENST00000533196 PSMC2P35998 433 aaKnown RBP24.93■■□□□ 1.58
SMPD1-209ENST00000533196 CDH8P55286 799 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 ADAM9Q13443 819 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 GAS6Q14393 721 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 EDRF1Q3B7T1 1238 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 C1orf220Q5T0J3 134 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 TRIM68Q6AZZ1 485 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 NUP93Q8N1F7 819 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 CPA6Q8N4T0 437 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 RIN3Q8TB24 985 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 OVCA2Q8WZ82 227 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 IMPG2Q9BZV3 1241 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 EPC1Q9H2F5 836 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 RMND1Q9NWS8 449 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 GPR179Q6PRD1 2367 aa24.93■■□□□ 1.58
SMPD1-209ENST00000533196 ZNF840PA6NDX5 716 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 IFNAR2P48551 515 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 GRSF1Q12849 480 aaKnown RBP eCLIP24.92■■□□□ 1.58
SMPD1-209ENST00000533196 ZCWPW2Q504Y3 356 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 TMEM196Q5HYL7 178 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 WDR44Q5JSH3 913 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 SCARA5Q6ZMJ2 495 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 FAM186BQ8IYM0 893 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 FMR1NBQ8N0W7 255 aaPredicted RBP24.92■■□□□ 1.58
SMPD1-209ENST00000533196 PDZD8Q8NEN9 1154 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 ATP2A3Q93084 1043 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 SMARCD1Q96GM5 515 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 GTPBP4Q9BZE4 634 aaKnown RBP24.92■■□□□ 1.58
SMPD1-209ENST00000533196 RBM12Q9NTZ6 932 aaKnown RBP24.92■■□□□ 1.58
SMPD1-209ENST00000533196 COMMD8Q9NX08 183 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 DUS2Q9NX74 493 aaKnown RBP24.92■■□□□ 1.58
SMPD1-209ENST00000533196 MAPK8IP1Q9UQF2 711 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 ZNF292O60281 2723 aa24.92■■□□□ 1.58
SMPD1-209ENST00000533196 OLFM2O95897 454 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 HLA-DRAP01903 254 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 GTF2H1P32780 548 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 PIK3CAP42336 1068 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 RAP1GAPP47736 663 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 CACNA2D1P54289 1103 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 SLC7A9P82251 487 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 SATB1Q01826 763 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 FAM35AQ86V20 835 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 CRYBG2Q8N1P7 616 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 SH3RF2Q8TEC5 729 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 GSDMAQ96QA5 445 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms