RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 TMEM8AQ9HCN3 771 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 TRPC7Q9HCX4 862 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 CLDN5O00501 218 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 STX10O60499 249 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 GADD45BO75293 160 aaPredicted RBP18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 PFKLP17858 780 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 CCNE1P24864 410 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 FKBP3Q00688 224 aaKnown RBP18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 STIM1Q13586 685 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 KRT39Q6A163 491 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 UNC93AQ86WB7 457 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 ADSSL1Q8N142 457 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 TAS1R2Q8TE23 839 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 NKD2Q969F2 451 aaPredicted RBP18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 EEF2KMTQ96G04 330 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 ZFYVE19Q96K21 471 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 MED10Q9BTT4 135 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 TTLL2Q9BWV7 592 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 ZNF518BQ9C0D4 1074 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 TRPM5Q9NZQ8 1165 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 FBXO4Q9UKT5 387 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 CCL26Q9Y258 94 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 PATJQ8NI35 1801 aa18.33■□□□□ 0.52
NCAPD3-210ENST00000533155 SPECC1L-ADORA2AF8WAN1 911 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CKMP06732 381 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 SP9P0CG40 484 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CTHP32929 405 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 PPP1R2P41236 205 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ASPAP45381 313 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 NDST1P52848 882 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 LRRC63Q05C16 580 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 FZD5Q13467 585 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 LRRC32Q14392 662 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ITPRIPL2Q3MIP1 535 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ZNF528Q3MIS6 628 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ISM2Q6H9L7 571 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ACOT1Q86TX2 421 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 ZNF687Q8N1G0 1237 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CRYBG2Q8N1P7 616 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CYP2S1Q96SQ9 504 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 SEMA4AQ9H3S1 761 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CYP3A43Q9HB55 503 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■■■□□ 19.2
NCAPD3-210ENST00000533155 GKN1Q9NS71 199 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 CHMP5Q9NZZ3 219 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 MAN1B1Q9UKM7 699 aa18.32■□□□□ 0.52
NCAPD3-210ENST00000533155 HELZP42694 1942 aaKnown RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 PSMA7O14818 248 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 SLC16A3O15427 465 aaKnown RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 RTN3O95197 1032 aaPredicted RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 HDCP19113 662 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 USP46P62068 366 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 PAQR9Q6ZVX9 377 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 FAM35AQ86V20 835 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 SMARCD1Q96GM5 515 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 DHTKD1Q96HY7 919 aaPredicted RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 SLITRK1Q96PX8 696 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 FAM83CQ9BQN1 747 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 CHRDQ9H2X0 955 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 LMAN1LQ9HAT1 526 aa18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 APOBEC3GQ9HC16 384 aaKnown RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 DMAP1Q9NPF5 467 aaPredicted RBP18.31■□□□□ 0.52
NCAPD3-210ENST00000533155 C2orf78A6NCI8 922 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 SOX9P48436 509 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 MXI1P50539 228 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 PMS1P54277 932 aaKnown RBP18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 AMPD2Q01433 879 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 TNK2Q07912 1038 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 PPP2R5DQ14738 602 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 PDGFRLQ15198 375 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 MAMSTRQ6ZN01 415 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 MAML2Q8IZL2 1156 aaPredicted RBP18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 ARL14EPQ8N8R7 260 aaPredicted RBP18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 TTC8Q8TAM2 541 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 NIF3L1Q9GZT8 377 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 TMEM30AQ9NV96 361 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 FANCMQ8IYD8 2048 aa18.3■□□□□ 0.52
NCAPD3-210ENST00000533155 TRIM49BA6NDI0 452 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 ZNF840PA6NDX5 716 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 AP1G2O75843 785 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 CHRNB1P11230 501 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 TCF3P15923 654 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 YWHAQP27348 245 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 CSTF1Q05048 431 aaKnown RBP18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 INCA1Q0VD86 236 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 TAF10Q12962 218 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 USP4Q13107 963 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 MTAPQ13126 283 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 ORC1Q13415 861 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 RUNX3Q13761 415 aa18.29■□□□□ 0.52
NCAPD3-210ENST00000533155 MTF1Q14872 753 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms