RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZNF131P52739 623 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 STX17P56962 302 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 OSTNP61366 133 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 FAM193AP78312 1265 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 CYP4F8P98187 520 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 MAPK7Q13164 816 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 STIM1Q13586 685 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 TRIP6Q15654 476 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 TAF12Q16514 161 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 SFR1Q86XK3 245 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 DAW1Q8N136 415 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 DHTKD1Q96HY7 919 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 IFT74Q96LB3 600 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 UBL7Q96S82 380 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 GTPBP2Q9BX10 602 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 TMEM74BQ9NUR3 256 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 MBD1Q9UIS9 605 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
TRAPPC4-213ENST00000533149 MTMR11A4FU01 709 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 K7ERI5 159 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 IKBKBO14920 756 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 PPP1R2P41236 205 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 SLC14A1Q13336 389 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 NCAPHQ15003 741 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 DUOXA1Q1HG43 343 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 LYSMD4Q5XG99 296 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 GUF1Q8N442 669 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 CEP120Q8N960 986 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 EZH1Q92800 747 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 USP13Q92995 863 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 MED15Q96RN5 788 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 CDT1Q9H211 546 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 ECT2Q9H8V3 914 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 PILRBQ9UKJ0 227 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 TRIP11Q15643 1979 aa12.13□□□□□ -0.47
TRAPPC4-213ENST00000533149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 PSMA7O14818 248 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 SERPINF2P08697 491 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 PLS3P13797 630 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 NMT1P30419 496 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 P2RY2P41231 377 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 PTGER3P43115 390 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 MYL5Q02045 173 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 NR1H3Q13133 447 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 PAK1Q13153 545 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 CRY1Q16526 586 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 SPATA1Q5VX52 437 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 MRPL44Q9H9J2 332 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 SEL1LQ9UBV2 794 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 RWDD2AQ9UIY3 292 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 APOBEC2Q9Y235 224 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 CCL26Q9Y258 94 aa12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-213ENST00000533149 SOAT2O75908 522 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 SYPP08247 313 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 FTH1P19P0C7X4 201 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MCF2P10911 925 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 CD59P13987 128 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 TPM4P67936 248 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 NAIF1Q69YI7 327 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 OVOS1Q6IE37 1185 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MINDY1Q8N5J2 469 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms