RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NT5C1BQ96P26 610 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 SLITRK6Q9H5Y7 841 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 GCNT4Q9P109 453 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 CA14Q9ULX7 337 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 PI15O43692 258 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 LRRN2O75325 713 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 SERPINC1P01008 464 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 PDGFRBP09619 1106 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 ATP1A3P13637 1013 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 GLULP15104 373 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF18P17022 549 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 VIPR2P41587 438 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 RAP1GAPP47736 663 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 PSMC1P62191 440 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 TCF15Q12870 199 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 MLF2Q15773 248 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 DDR2Q16832 855 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 GPR158Q5T848 1215 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 VITQ6UXI7 678 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 MYLPFQ96A32 169 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 NELL2Q99435 816 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 SMYD3Q9H7B4 428 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 EHD2Q9NZN4 543 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 LIMA1Q9UHB6 759 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
TRAPPC4-212ENST00000533058 KANSL1LA0AUZ9 987 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 SLC38A8A6NNN8 435 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 A8MXQ7 604 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 TRIM66O15016 1216 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 PMM2O15305 246 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CHADO15335 359 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CD58P19256 250 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 GPR15P49685 360 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CDR1P51861 262 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 NHLH1Q02575 133 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 STXBP5Q5T5C0 1151 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 MON1AQ86VX9 555 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 UNC93AQ86WB7 457 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CMTM8Q8IZV2 173 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 CRYBG2Q8N1P7 616 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 B3GALNT2Q8NCR0 500 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 TATDN2Q93075 761 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 SLC46A2Q9BY10 475 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 BRD9Q9H8M2 597 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 APOBEC3GQ9HC16 384 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 SIT1Q9Y3P8 196 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 KMT2EQ8IZD2 1858 aa13.75□□□□□ -0.21
TRAPPC4-212ENST00000533058 ARNTLO00327 626 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 STK25O00506 426 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF263O14978 683 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 PFKLP17858 780 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 BDNFP23560 247 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 ASPAP45381 313 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 PPP3CCP48454 512 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 CDH8P55286 799 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 CYP4F8P98187 520 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 CYP27A1Q02318 531 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 UBXN1Q04323 297 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 GRM2Q14416 872 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 MDH1BQ5I0G3 518 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 DENND5BQ6ZUT9 1274 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 SCN4BQ8IWT1 228 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 PPM1KQ8N3J5 372 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 CELF5Q8N6W0 485 aaKnown RBP13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 MRPS31Q92665 395 aaKnown RBP13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 RSPRY1Q96DX4 576 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 TTLL2Q9BWV7 592 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 DNAI2Q9GZS0 605 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 DPEP3Q9H4B8 488 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 FAM124BQ9H5Z6 455 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 KIF9Q9HAQ2 790 aa13.74□□□□□ -0.21
TRAPPC4-212ENST00000533058 CYP3A43Q9HB55 503 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms