RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 UBA3Q8TBC4 463 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 SMOQ99835 787 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 NUCKS1Q9H1E3 243 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 ACP6Q9NPH0 428 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 MAGED2Q9UNF1 606 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 USP15Q9Y4E8 981 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 TSC2P49815 1807 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 M0QYV0 167 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNF197O14709 1029 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 RTN3O95197 1032 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 FGF19O95750 216 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 RHOP08100 348 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 TPM1P09493 284 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 SETSIPP0DME0 302 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 MYL4P12829 197 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 FERP16591 822 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PDE6CP51160 858 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 ARID5AQ03989 594 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PDE4CQ08493 712 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 BST2Q10589 180 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 CBX2Q14781 532 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PABPC1LQ4VXU2 614 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PDZD4Q76G19 769 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 HS6ST3Q8IZP7 471 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 SUSD6Q92537 303 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 BAP1Q92560 729 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 MYRFLQ96LU7 910 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 TTYH3Q9C0H2 523 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 WDR6Q9NNW5 1121 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 AVENQ9NQS1 362 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 HCFC1R1Q9NWW0 138 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 LUC7L2Q9Y383 392 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 MRPS23Q9Y3D9 190 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 REV3LO60673 3130 aa11.88□□□□□ -0.51
TRAPPC4-211ENST00000533012 EYSQ5T1H1 3165 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 XPO1O14980 1071 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 HMGA1P17096 107 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 FSHRP23945 695 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 SSTR3P32745 418 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNF75DP51815 510 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 EPHA5P54756 1037 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZBED6P86452 979 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 MTMR3Q13615 1198 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 TRIM14Q14142 442 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 SMAD2Q15796 467 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 ASIC2Q16515 512 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 MEA1Q16626 185 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 PKDCCQ504Y2 493 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 SFMBT2Q5VUG0 894 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 PIGZQ86VD9 579 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 FEZF2Q8TBJ5 459 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLC35F5Q8WV83 523 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 MRFAP1L1Q96HT8 127 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 LHX5Q9H2C1 402 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 CDH22Q9UJ99 828 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 CEP83Q9Y592 693 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
TRAPPC4-211ENST00000533012 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TNFRSF10BO14763 440 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 GYPCP04921 128 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 YWHAQP27348 245 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 GABRR2P28476 465 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 CASP14P31944 242 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 GPD2P43304 727 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 PLA2G4AP47712 749 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLC5A3P53794 718 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 NTHL1P78549 312 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 CDR2Q01850 454 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TAF3Q5VWG9 929 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 DENND1BQ6P3S1 775 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TMC6Q7Z403 805 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 IRF2BP2Q7Z5L9 587 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 EPS8L1Q8TE68 723 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms