RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 RDM1Q8NG50 284 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 CDKL2Q92772 493 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 BTBD10Q9BSF8 475 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 MECRQ9BV79 373 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 ST6GALNAC4Q9H4F1 302 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 ZMYND8Q9ULU4 1186 aaPredicted RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.51
NXF1-211ENST00000531709 FCHO1O14526 889 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 ABHD2P08910 425 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 CD48P09326 243 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 SDC4P31431 198 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 AQP5P55064 265 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 MGAT5Q09328 741 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 CLNKQ7Z7G1 428 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 TEX9Q8N6V9 391 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 FAM49BQ9NUQ9 324 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 ARL8BQ9NVJ2 186 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 NDE1Q9NXR1 346 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 PEX10O60683 326 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 FAM155BO75949 473 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 CYP1A1P04798 512 aaPredicted RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 ITGB3P05106 788 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 MIPP30301 263 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 MRPS35P82673 323 aaKnown RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 CXCL9Q07325 125 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 SURF1Q15526 300 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 GRAMD1BQ3KR37 738 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 SLCO2A1Q92959 643 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 MTBPQ96DY7 904 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 WNK4Q96J92 1243 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 STRA6Q9BX79 667 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 WWP1Q9H0M0 922 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 LRMDAQ9H2I8 198 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 SERPINB4P48594 390 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 TEKT4Q8WW24 435 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 SCG3Q8WXD2 468 aaKnown RBP11.83□□□□□ -0.52
NXF1-211ENST00000531709 INPP5DQ92835 1189 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 RSAD1Q9HA92 442 aa11.83□□□□□ -0.52
NXF1-211ENST00000531709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 ZNF536O15090 1300 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 CFLARO15519 480 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 GRIN3BO60391 1043 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 STK10O94804 968 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 KDELR1P24390 212 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 RFC5P40937 340 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 FKBP1AP62942 108 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 STX3Q13277 289 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 RSPH3Q86UC2 560 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 CEP120Q8N960 986 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 DNAAF3Q8N9W5 541 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 PTPRJQ12913 1337 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 VNN1O95497 513 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 DPYSL3Q14195 570 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TAF5Q15542 800 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 KHDC1Q4VXA5 237 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 RFWD3Q6PCD5 774 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 SLC30A9Q6PML9 568 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 OR6B3Q8NGW1 331 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 APOL1O14791 398 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 OGTO15294 1046 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TM9SF1O15321 606 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 CXCL8P10145 99 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 SKIV2L2P42285 1042 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 EFNA5P52803 228 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 WNT7BP56706 349 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 BACE1P56817 501 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 C15orf59Q2T9L4 293 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 RNASEH2BQ5TBB1 312 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 THEMIS2Q5TEJ8 643 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 TTC39BQ5VTQ0 682 aaPredicted RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 CPT1BQ92523 772 aa11.82□□□□□ -0.52
NXF1-211ENST00000531709 DRG1Q9Y295 367 aaKnown RBP11.82□□□□□ -0.52
NXF1-211ENST00000531709 HNRNPCL1O60812 293 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 GJB1P08034 283 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 KLRC2P26717 231 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 CCNHP51946 323 aaPredicted RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 AP3M2P53677 418 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 AP2B1P63010 937 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ATF7IP2Q5U623 682 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 DSTYKQ6XUX3 929 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms