RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ADHFE1Q8IWW8 467 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 DUSP16Q9BY84 665 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 PIDD1Q9HB75 910 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 KRT82Q9NSB4 513 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 FAM207AQ9NSI2 230 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-206ENST00000531480 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.04
CPSF1-206ENST00000531480 SLC38A8A6NNN8 435 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 LOC730098B7Z3J9 87 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 F8VZ95 297 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 FGF19O95750 216 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 FAM200BP0CF97 657 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 NPR3P17342 541 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 CLCN1P35523 988 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 UBASH3AP57075 661 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 NTHL1P78549 312 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 ZP2Q05996 745 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-206ENST00000531480 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 DENND5BQ6ZUT9 1274 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 GAREM2Q75VX8 874 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 TMEM150AQ86TG1 271 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 HS6ST3Q8IZP7 471 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 CORO1BQ9BR76 489 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 TTYH3Q9C0H2 523 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 ZNF334Q9HCZ1 680 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-206ENST00000531480 ASAH2Q9NR71 780 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 COMMD8Q9NX08 183 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPSF1-206ENST00000531480 TSPAN16Q9UKR8 245 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 NCOR1O75376 2440 aa15.32■□□□□ 0.04
CPSF1-206ENST00000531480 NUP210Q8TEM1 1887 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-206ENST00000531480 SOBPA7XYQ1 873 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-206ENST00000531480 ZNF197O14709 1029 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 F11P03951 625 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 FSHRP23945 695 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 ANXA13P27216 316 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 ADORA2BP29275 332 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 POLR2FP61218 127 aaKnown RBP15.31■□□□□ 0.04
CPSF1-206ENST00000531480 MTMR3Q13615 1198 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 RAB41Q5JT25 222 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 SDHAF4Q5VUM1 108 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 POTEHQ6S545 545 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 SCN4BQ8IWT1 228 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 RNF214Q8ND24 703 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 GPR152Q8TDT2 470 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 GIPC2Q8TF65 315 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 ZNF606Q8WXB4 792 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 EHD2Q9NZN4 543 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 UXTQ9UBK9 157 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-206ENST00000531480 MYO6Q9UM54 1294 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 ZFP37Q9Y6Q3 630 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-206ENST00000531480 NCANO14594 1321 aa15.31■□□□□ 0.04
CPSF1-206ENST00000531480 TADA3O75528 432 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 KRT5P13647 590 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 CD19P15391 556 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 BRD2P25440 801 aaKnown RBP15.3■□□□□ 0.04
CPSF1-206ENST00000531480 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
CPSF1-206ENST00000531480 BCAT1P54687 386 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 MAP3K7CLP57077 242 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 BPIFB4P59827 614 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 USP46P62068 366 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 CYP4A22Q5TCH4 519 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 PDZD4Q76G19 769 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-206ENST00000531480 OTOP3Q7RTS5 596 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 ZDHHC14Q8IZN3 488 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 NUP93Q8N1F7 819 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 ITFG1Q8TB96 612 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 SHKBP1Q8TBC3 707 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 SLC35F5Q8WV83 523 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 TCEAL4Q96EI5 215 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 RBSNQ9H1K0 784 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 ACP6Q9NPH0 428 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 GDE1Q9NZC3 331 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 NR2E1Q9Y466 385 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 USP3Q9Y6I4 520 aa15.3■□□□□ 0.04
CPSF1-206ENST00000531480 MYO16Q9Y6X6 1858 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 ITIH6Q6UXX5 1313 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 CYP26A1O43174 497 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 RTN3O95197 1032 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-206ENST00000531480 SETSIPP0DME0 302 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 WEE1P30291 646 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 CDC25CP30307 473 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 GNA15P30679 374 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 PLA2G4AP47712 749 aa15.29■□□□□ 0.04
CPSF1-206ENST00000531480 SLC5A3P53794 718 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms