RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ASIC5Q9NY37 505 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 TFCP2L1Q9NZI6 479 aa5.72□□□□□ -1.49
PTPRK-220ENST00000531466 H3BNX3 289 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 GABRDO14764 452 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 SLC16A6O15403 523 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 GCATO75600 419 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 A1BGP04217 495 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 CSF1RP07333 972 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 GRPP07492 148 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 ADORA2AP29274 412 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 PDE6CP51160 858 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 ZNF91Q05481 1191 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 ITKQ08881 620 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 MTMR1Q13613 665 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 AMOTQ4VCS5 1084 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 BCDIN3DQ7Z5W3 292 aaKnown RBP5.71□□□□□ -1.5
PTPRK-220ENST00000531466 OSCP1Q8WVF1 389 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 SQORQ9Y6N5 450 aa5.71□□□□□ -1.5
PTPRK-220ENST00000531466 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPRK-220ENST00000531466 CRYABP02511 175 aaKnown RBP5.7□□□□□ -1.5
PTPRK-220ENST00000531466 PRKCBP05771 671 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 PDCP20941 246 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 MAP2K6P52564 334 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 SEMA3AQ14563 771 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 DLK2Q6UY11 383 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 C9orf47Q6ZRZ4 202 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 CAND1Q86VP6 1230 aaKnown RBP5.7□□□□□ -1.5
PTPRK-220ENST00000531466 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-220ENST00000531466 ADAMTS18Q8TE60 1221 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 LYZL4Q96KX0 146 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
PTPRK-220ENST00000531466 CXorf36Q9H7Y0 433 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 PNPOQ9NVS9 261 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 SHOC2Q9UQ13 582 aa5.7□□□□□ -1.5
PTPRK-220ENST00000531466 CYSRT1A8MQ03 144 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 CLSTN1O94985 981 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 PSG1P11464 419 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 AWAT1Q58HT5 328 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 PIP4P1Q86T03 277 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 ZNF280BQ86YH2 543 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 BRIX1Q8TDN6 353 aaKnown RBP5.69□□□□□ -1.5
PTPRK-220ENST00000531466 MOGAT1Q96PD6 335 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 SIGLEC11Q96RL6 698 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 PRR25Q96S07 402 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 POT1Q9NUX5 634 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 TMEM184CQ9NVA4 438 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 PRKAB1Q9Y478 270 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 PLEKHM1Q9Y4G2 1056 aa5.69□□□□□ -1.5
PTPRK-220ENST00000531466 DTNBO60941 627 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 VIPR2P41587 438 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 GUCY2FP51841 1108 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 SOX8P57073 446 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 PSG6Q00889 435 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 MYO1EQ12965 1108 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 ERV3-1Q14264 604 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 CELF5Q8N6W0 485 aaKnown RBP5.68□□□□□ -1.5
PTPRK-220ENST00000531466 ZNF548Q8NEK5 533 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-220ENST00000531466 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-220ENST00000531466 HIPK2Q9H2X6 1198 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 PI4KBQ9UBF8 816 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 HEY2Q9UBP5 337 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 PROCRQ9UNN8 238 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
PTPRK-220ENST00000531466 FAM90A8PA6NJQ4 464 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 H3BUI4 141 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 KATNA1O75449 491 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 RNF8O76064 485 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 FAM90A13PP0C7W8 464 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 FAM90A24PP0C7X0 464 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
PTPRK-220ENST00000531466 PLS1Q14651 629 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 EMC10Q5UCC4 262 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 RBMXL3Q8N7X1 1067 aaKnown RBP5.67□□□□□ -1.5
PTPRK-220ENST00000531466 ZNF398Q8TD17 642 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 MAP4K1Q92918 833 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 FAM167AQ96KS9 214 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 CCDC17Q96LX7 622 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 XPR1Q9UBH6 696 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 PCDHA6Q9UN73 950 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 SNX14Q9Y5W7 946 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 ZMYM2Q9UBW7 1377 aa5.67□□□□□ -1.5
PTPRK-220ENST00000531466 BTBD19C9JJ37 291 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 LRPAP1P30533 357 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 ZIK1Q3SY52 487 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-220ENST00000531466 CCDC157Q569K6 752 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 IZUMO1Q8IYV9 350 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 ABRAQ8N0Z2 381 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 PNISRQ8TF01 805 aaKnown RBP5.66□□□□□ -1.5
PTPRK-220ENST00000531466 VPS33BQ9H267 617 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 AMFRQ9UKV5 643 aa5.66□□□□□ -1.5
PTPRK-220ENST00000531466 GTPBP1O00178 669 aaKnown RBP5.65□□□□□ -1.5
PTPRK-220ENST00000531466 SMAD6O43541 496 aaKnown RBP5.65□□□□□ -1.5
PTPRK-220ENST00000531466 FGAP02671 866 aa5.65□□□□□ -1.5
PTPRK-220ENST00000531466 UCP3P55916 312 aa5.65□□□□□ -1.5
PTPRK-220ENST00000531466 SATB1Q01826 763 aa5.65□□□□□ -1.5
PTPRK-220ENST00000531466 USP45Q70EL2 814 aa5.65□□□□□ -1.5
PTPRK-220ENST00000531466 PRR18Q8N4B5 295 aa5.65□□□□□ -1.5
PTPRK-220ENST00000531466 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms