RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 NBL1P41271 181 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 RPS9P46781 194 aaKnown RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 STIM1Q13586 685 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF268Q14587 947 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 FOXR2Q6PJQ5 311 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 SARM1Q6SZW1 724 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 UNC93AQ86WB7 457 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 B3GALNT2Q8NCR0 500 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 RSPRY1Q96DX4 576 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 SEMA4AQ9H3S1 761 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 TRPM5Q9NZQ8 1165 aa11.69□□□□□ -0.54
CAPN1-221ENST00000531068 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-221ENST00000531068 DENND4AQ7Z401 1863 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 TRAV19A0A0A6YYK7 116 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 ARNTLO00327 626 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 LAMTOR5O43504 91 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 ASS1P00966 412 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 HLA-DRAP01903 254 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 USP17L7P0C7H9 530 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 EPB41P11171 864 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 CCNE1P24864 410 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 CDC25BP30305 580 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 PPP1R2P41236 205 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 GCLMP48507 274 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 CDH8P55286 799 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 MCCD1P59942 119 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 NOP14P78316 857 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 FKBP3Q00688 224 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 AMPD2Q01433 879 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 ZCWPW2Q504Y3 356 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 KRT39Q6A163 491 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 RALGPS2Q86X27 583 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 CRYBG2Q8N1P7 616 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 LRRC3BQ96PB8 259 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 MED10Q9BTT4 135 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 NAT10Q9H0A0 1025 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 SMYD3Q9H7B4 428 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 TMEM8AQ9HCN3 771 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 TRPC7Q9HCX4 862 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 FAM86C1Q9NVL1 165 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 FBXO4Q9UKT5 387 aa11.68□□□□□ -0.54
CAPN1-221ENST00000531068 MTCL1Q9Y4B5 1905 aaKnown RBP11.68□□□□□ -0.54
CAPN1-221ENST00000531068 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 F8VP50 259 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 LRRN2O75325 713 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 RTN3O95197 1032 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 HDCP19113 662 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 MYL5Q02045 173 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 PDGFRLQ15198 375 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 CCDC142Q17RM4 750 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 ITPRIPL2Q3MIP1 535 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF528Q3MIS6 628 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 CDKAL1Q5VV42 579 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 TTI2Q6NXR4 508 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 ZC3H14Q6PJT7 736 aaKnown RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 APTXQ7Z2E3 356 aaKnown RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 IRF2BP1Q8IU81 584 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 NKD2Q969F2 451 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 DHTKD1Q96HY7 919 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 SLITRK1Q96PX8 696 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 TTLL2Q9BWV7 592 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 B3GNT5Q9BYG0 378 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 DPEP3Q9H4B8 488 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 LMAN1LQ9HAT1 526 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 COMMD8Q9NX08 183 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 NDRG2Q9UN36 371 aaKnown RBP11.67□□□□□ -0.54
CAPN1-221ENST00000531068 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 C2orf16Q68DN1 1984 aa11.67□□□□□ -0.54
CAPN1-221ENST00000531068 PSMA7O14818 248 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 SLC16A3O15427 465 aaKnown RBP11.66□□□□□ -0.54
CAPN1-221ENST00000531068 GFRA3O60609 400 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 CKMP06732 381 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 SP9P0CG40 484 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms