RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RXFP3Q9NSD7 469 aa16.89■□□□□ 0.29
CHMP4A-204ENST00000530996 SMPD4Q9NXE4 827 aa16.89■□□□□ 0.29
CHMP4A-204ENST00000530996 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
CHMP4A-204ENST00000530996 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
CHMP4A-204ENST00000530996 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
CHMP4A-204ENST00000530996 F8VP50 259 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 LEFTY2O00292 366 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 DCLK1O15075 740 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 LIMK1P53667 647 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 AMPD3Q01432 767 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 FAM26FQ5R3K3 315 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 STPG1Q5TH74 334 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 ANO7Q6IWH7 933 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 NELFCDQ8IXH7 590 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 CCDC127Q96BQ5 260 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 PCED1BQ96HM7 432 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 EDEM2Q9BV94 578 aa16.88■□□□□ 0.29
CHMP4A-204ENST00000530996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 SPTLC2O15270 562 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 STX6O43752 255 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 KRT37O76014 449 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 NASPP49321 788 aaPredicted RBP16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 USP46P62068 366 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 TRPC3Q13507 836 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 TRAPPC11Q7Z392 1133 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 FILIP1Q7Z7B0 1213 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 EZH1Q92800 747 aaPredicted RBP16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 CGRRF1Q99675 332 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 TRIM9Q9C026 710 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 LINC00597Q9H2U6 94 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 CUEDC2Q9H467 287 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 AGPAT3Q9NRZ7 376 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 ANGPTL2Q9UKU9 493 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 INVSQ9Y283 1065 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 CPQQ9Y646 472 aa16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 MORC2Q9Y6X9 1032 aaPredicted RBP16.87■□□□□ 0.29
CHMP4A-204ENST00000530996 CLIC2O15247 247 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 PHACTR2O75167 634 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 WDR72Q3MJ13 1102 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 TDRD10Q5VZ19 366 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 ZC3H10Q96K80 434 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 ELOVL4Q9GZR5 314 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 DUSP15Q9H1R2 295 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 CFAP97Q9P2B7 532 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 EPG5Q9HCE0 2579 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 ATP8B3O60423 1300 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 UBE4BO95155 1302 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 OBSL1O75147 1896 aa16.86■□□□□ 0.29
CHMP4A-204ENST00000530996 ACACBO00763 2458 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 A8MXQ7 604 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 CAVIN2O95810 425 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 CYP17A1P05093 508 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 MBL2P11226 248 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 TCF3P15923 654 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 PFKLP17858 780 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 KDSRQ06136 332 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 CYP24A1Q07973 514 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 BIRC3Q13489 604 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 PSMD6Q15008 389 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 USP39Q53GS9 565 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 PLA2G2CQ5R387 149 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 SCARA5Q6ZMJ2 495 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 CYP2U1Q7Z449 544 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 IQUBQ8NA54 791 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 LINC00301Q8NCQ3 95 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 USP33Q8TEY7 942 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 INTS4Q96HW7 963 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 CEP295NLQ96MC4 621 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 ZNF518BQ9C0D4 1074 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 DPEP3Q9H4B8 488 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 KBTBD4Q9NVX7 518 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 NXF1Q9UBU9 619 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 EBF1Q9UH73 591 aa16.85■□□□□ 0.29
CHMP4A-204ENST00000530996 TPRP12270 2363 aaKnown RBP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 SLC9A3R1O14745 358 aaPredicted RBP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 ADH1CP00326 375 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 OPRD1P41143 372 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 PPP3CCP48454 512 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 TAF10Q12962 218 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 E2F4Q16254 413 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
CHMP4A-204ENST00000530996 C11orf74Q86VG3 221 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms