RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 AMACRQ9UHK6 382 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 ANAPC7Q9UJX3 599 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 KIAA1257Q9ULG3 409 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 DERAQ9Y315 318 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.46
PCF11-205ENST00000530906 SLC15A5A6NIM6 579 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ARIH2O95376 493 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ECEL1O95672 775 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 LGALS2P05162 132 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 NUDT17P0C025 328 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 MYZAPP0CAP1 466 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 CAPN2P17655 700 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 FSTP19883 344 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 MMP8P22894 467 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ECHS1P30084 290 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 RDXP35241 583 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 SOX18P35713 384 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 LMAN1P49257 510 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 MBTD1Q05BQ5 628 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ARHGAP1Q07960 439 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 FSTL1Q12841 308 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 PIGHQ14442 188 aaPredicted RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 ACAP1Q15027 740 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 STILQ15468 1287 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 FAM110CQ1W6H9 321 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ZNF699Q32M78 642 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 DCAF4L1Q3SXM0 396 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 DUSP28Q4G0W2 176 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 AGBL2Q5U5Z8 902 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 IQSEC1Q6DN90 963 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 EFCAB12Q6NXP0 572 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 DRICH1Q6PGQ1 229 aaPredicted RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 TMEM270Q6UE05 265 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 KDM7AQ6ZMT4 941 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 TMC3Q7Z5M5 1100 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 POLNQ7Z5Q5 900 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 HOOK3Q86VS8 718 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 SPATS2Q86XZ4 545 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 LINC01465Q8N7H1 131 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 NIPA2Q8N8Q9 360 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 PRELID2Q8N945 189 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 C3orf20Q8ND61 904 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 FNIP1Q8TF40 1166 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 MAGOHBQ96A72 148 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 ATP6V1G3Q96LB4 118 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 NCAPGQ9BPX3 1015 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ADPGKQ9BRR6 497 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 TMEM109Q9BVC6 243 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 AP1M1Q9BXS5 423 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 BCO2Q9BYV7 579 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 HAPLN2Q9GZV7 340 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 LHX5Q9H2C1 402 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ABHD16BQ9H3Z7 469 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 GOLPH3Q9H4A6 298 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 RPF1Q9H9Y2 349 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 SRA1Q9HD15 236 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 PRDM10Q9NQV6 1147 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.89□□□□□ -1.47
PCF11-205ENST00000530906 ST7Q9NRC1 585 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
PCF11-205ENST00000530906 ADAM22Q9P0K1 906 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 WHRNQ9P202 907 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ITGA11Q9UKX5 1188 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 EFR3BQ9Y2G0 817 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 C2CD2Q9Y426 696 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 NUB1Q9Y5A7 615 aa5.89□□□□□ -1.47
PCF11-205ENST00000530906 ANK1P16157 1881 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 RALGAPA2Q2PPJ7 1873 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 MCM3APO60318 1980 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ESYT3A0FGR9 886 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 INO80B-WBP1J3KQ70 363 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PDHXO00330 501 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 TTI1O43156 1089 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 DAPK3O43293 454 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 RPLP2P05387 115 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 PGK2P07205 417 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 SRGAP2CP0DJJ0 459 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PYGMP11217 842 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ITGA4P13612 1032 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 YBX3P16989 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
PCF11-205ENST00000530906 ITIH2P19823 946 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 RRM1P23921 792 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ADORA2AP29274 412 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 HSD17B3P37058 310 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 COILP38432 576 aaPredicted RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 SNX16P57768 344 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CALCOCO2Q13137 446 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 GRB14Q14449 540 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CCNG2Q16589 344 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 TMEM132AQ24JP5 1023 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 SGO2Q562F6 1265 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ZNF667Q5HYK9 610 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 WDR78Q5VTH9 848 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 NAA35Q5VZE5 725 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 GDF6Q6KF10 455 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms