RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ADGRD1Q6QNK2 874 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CXorf38Q8TB03 319 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 RAB3IL1Q8TBN0 382 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SLC26A7Q8TE54 656 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ARMCX1Q9P291 453 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PCDHGB4Q9UN71 923 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PRELID1Q9Y255 219 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PCDHGB5Q9Y5G0 923 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 NRAPQ86VF7 1730 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 A0A1W2PPM1 405 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 SLC37A4O43826 429 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TFPTP0C1Z6 253 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 CPA2P48052 419 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 NOVP48745 357 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TUBA1BP68363 451 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 GPC5P78333 572 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 OXA1LQ15070 435 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 ZBED5Q49AG3 693 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 GJC2Q5T442 439 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TUBA1AQ71U36 451 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 MMAAQ8IVH4 418 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 SLC25A41Q8N5S1 370 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TCP10LQ8TDR4 215 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 ISOC1Q96CN7 298 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 NAP1L4Q99733 375 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 EHD1Q9H4M9 534 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 STN1Q9H668 368 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 C10orf88Q9H8K7 445 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TAS2R14Q9NYV8 317 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 F5H6K3 240 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 H6PDO95479 791 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 PLS3P13797 630 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 KLRC2P26717 231 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 IL6STP40189 918 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 STX3Q13277 289 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 SEPT7Q16181 437 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 GRAMD1BQ3KR37 738 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 MEX3CQ5U5Q3 659 aaKnown RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 ANKRD13BQ86YJ7 626 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 MCF2L2Q86YR7 1114 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC33Q8N5R6 958 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 SPERTQ8NA61 448 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 CD209Q9NNX6 404 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 CDH22Q9UJ99 828 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 POMPQ9Y244 141 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 HEMK1Q9Y5R4 338 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-214ENST00000530886 LOXHD1Q8IVV2 1947 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 SNED1Q8TER0 1413 aa8.47□□□□□ -1.05
CSDE1-214ENST00000530886 TRIM64A6NGJ6 449 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 H3BNH8 94 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 CYP26A1O43174 497 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ABCB4P21439 1286 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ADCY8P40145 1251 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 CASP5P51878 434 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 DMPKQ09013 629 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ADGRE1Q14246 886 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 SLC15A2Q16348 729 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ZFP1Q6P2D0 407 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 FASTKD5Q7L8L6 764 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 MIER3Q7Z3K6 550 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 NEK8Q86SG6 692 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 AMIGO2Q86SJ2 522 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 PRPF39Q86UA1 669 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 SLC35C1Q96A29 364 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC127Q96BQ5 260 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 MROQ9BYG7 248 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 PAIP1Q9H074 479 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 APPL1Q9UKG1 709 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ATRNL1Q5VV63 1379 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 KRBA1A5PL33 1030 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ALOX5P09917 674 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 NR2F2P24468 414 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 PCYT1AP49585 367 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 BCAMP50895 628 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 GPC3P51654 580 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 CSE1LP55060 971 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 GALNT2Q10471 571 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 NFIL3Q16649 462 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 AGAP7PQ5VUJ5 663 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 IZUMO3Q5VZ72 239 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 POTEAQ6S8J7 498 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 HAUS6Q7Z4H7 955 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 WDR75Q8IWA0 830 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 HAS1Q92839 578 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 CNDP2Q96KP4 475 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms