RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CYP2J2P51589 502 aa22.16■■□□□ 1.14
TSPAN4-219ENST00000530404 EPM2AIP1Q7L775 607 aaPredicted RBP22.16■■□□□ 1.14
TSPAN4-219ENST00000530404 PCED1BQ96HM7 432 aa22.16■■□□□ 1.14
TSPAN4-219ENST00000530404 TNRC6BQ9UPQ9 1833 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 CCDC163A0A0D9SF12 145 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 SCAMP3O14828 347 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 DCLK1O15075 740 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 EIF3DO15371 548 aaKnown RBP eCLIP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 TGFB1I1O43294 461 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 ADRB1P08588 477 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 TNNI1P19237 187 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 ANXA13P27216 316 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 SEC13P55735 322 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 SNRNP35Q16560 246 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 FOXD4L6Q3SYB3 417 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 FAM26FQ5R3K3 315 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 FOXD4L3Q6VB84 417 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 DENND5BQ6ZUT9 1274 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 HS2ST1Q7LGA3 356 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 C12orf50Q8NA57 414 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 ZNF507Q8TCN5 953 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 CCDC127Q96BQ5 260 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 SPATA17Q96L03 361 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 DPEP3Q9H4B8 488 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 AGPAT3Q9NRZ7 376 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 ARHGAP26Q9UNA1 814 aa22.15■■□□□ 1.14
TSPAN4-219ENST00000530404 F8VP50 259 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 K7ELQ4 463 aaPredicted RBP22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 LEFTY2O00292 366 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 PI4KAP42356 2102 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 CACNA2D1P54289 1103 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 IFRD2Q12894 506 aaPredicted RBP22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 DMC1Q14565 340 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 FBXO43Q4G163 708 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 SHC4Q6S5L8 630 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 VSTM1Q6UX27 236 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 CAMKK1Q8N5S9 505 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 OR6B3Q8NGW1 331 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 MYCBPAPQ8TBZ2 947 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 CGRRF1Q99675 332 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 LRRC27Q9C0I9 530 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 BLZF1Q9H2G9 400 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 SNX25Q9H3E2 840 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 TMEM30AQ9NV96 361 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 TRPM5Q9NZQ8 1165 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 INVSQ9Y283 1065 aa22.14■■□□□ 1.13
TSPAN4-219ENST00000530404 PPP6R2O75170 966 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 ABL1P00519 1130 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 ZNF806P0C7X5 589 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 GNL1P36915 607 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 CYP24A1Q07973 514 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 MAPRE1Q15691 268 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 SYT13Q7L8C5 426 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 SCFD1Q8WVM8 642 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 ZNF516Q92618 1163 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 LOXL4Q96JB6 756 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 FNBP1Q96RU3 617 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 RNF38Q9H0F5 515 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 CUEDC2Q9H467 287 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 KIAA1586Q9HCI6 787 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 SMPD4Q9NXE4 827 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 ADAMTS9Q9P2N4 1935 aa22.13■■□□□ 1.13
TSPAN4-219ENST00000530404 PLXND1Q9Y4D7 1925 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 CLDN5O00501 218 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 TRIM66O15016 1216 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 TCF3P15923 654 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 OPRD1P41143 372 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 AMPD3Q01432 767 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 NR1H3Q13133 447 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 PSMD6Q15008 389 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 GAB4Q2WGN9 574 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 PLK5Q496M5 336 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 IL31Q6EBC2 164 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 TCEAL6Q6IPX3 200 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 TCEAL3Q969E4 200 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 EXOC4Q96A65 974 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 ELMO3Q96BJ8 720 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 ZNF396Q96N95 335 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 TTLL2Q9BWV7 592 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 ZNF518BQ9C0D4 1074 aa22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 DUSP15Q9H1R2 295 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-219ENST00000530404 ZNF840PA6NDX5 716 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 POLR2DO15514 142 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 CUTAO60888 179 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 NFATC1O95644 943 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 APBB3O95704 486 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 PTPN1P18031 435 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 MPLP40238 635 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 CASP4P49662 377 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 MYL6P60660 151 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 TNNC1P63316 161 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 WDR72Q3MJ13 1102 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 C2orf27AQ580R0 203 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 FILIP1Q7Z7B0 1213 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 SFTPA1Q8IWL2 248 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 IQUBQ8NA54 791 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 XXYLT1Q8NBI6 393 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 ACDQ96AP0 544 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms