RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 CYBBP04839 570 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 IFI35P80217 286 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC34A1Q06495 639 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 EFCAB1Q9HAE3 211 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 UBQLN1Q9UMX0 589 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 E2F8A0AVK6 867 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 PIK3CDO00329 1044 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 RRM1P23921 792 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 HMOX2P30519 316 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 ELF3P78545 371 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 EARS2Q5JPH6 523 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 LSM7Q9UK45 103 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 PCDHGC5Q9Y5F6 944 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 PDE2AO00408 941 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 ZBTB39O15060 712 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 TLR2O60603 784 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC2A3P11169 496 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 PSMC3P17980 439 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 RPL21P46778 160 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 CYP4A22Q5TCH4 519 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 TMPRSS6Q8IU80 811 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 RNF217Q8TC41 542 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC26A2P50443 739 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 PREPLQ4J6C6 727 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 TBC1D19Q8N5T2 526 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 TATDN2Q93075 761 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 CCDC126Q96EE4 140 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 RIC8BQ9NVN3 520 aa16.01■□□□□ 0.15
PCDHA4-203ENST00000530339 CCDC78A2IDD5 438 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 TOMM70O94826 608 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 HIST1H2AGP0C0S8 130 aaPredicted RBP16■□□□□ 0.15
PCDHA4-203ENST00000530339 VDRP11473 427 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 HIST1H2ADP20671 130 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 CBWD2Q8IUF1 395 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 MREGQ8N565 214 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC20A1Q8WUM9 679 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 DCUN1D1Q96GG9 259 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 HIST1H2AHQ96KK5 128 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 HIST1H2AJQ99878 128 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 C10orf88Q9H8K7 445 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 INTS13Q9NVM9 706 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC39A10Q9ULF5 831 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 CETPP11597 493 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 PAX7P23759 505 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 PTGER2P43116 358 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
PCDHA4-203ENST00000530339 GPR141Q7Z602 305 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 HPDLQ96IR7 371 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 CGRRF1Q99675 332 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 TSC22D4Q9Y3Q8 395 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 OTUD4Q01804 1114 aaKnown RBP16■□□□□ 0.15
PCDHA4-203ENST00000530339 BNC2Q6ZN30 1099 aaPredicted RBP16■□□□□ 0.15
PCDHA4-203ENST00000530339 STK32AQ8WU08 396 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 BTBD10Q9BSF8 475 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 SYNPO2Q9UMS6 1093 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 ALBP02768 609 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 LAYNQ6UX15 382 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 C4orf19Q8IY42 314 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 TMCO5AQ8N6Q1 288 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
PCDHA4-203ENST00000530339 RGS4P49798 205 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 TAF6P49848 677 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 NUP107P57740 925 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 MTFR1Q15390 333 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 GOLGA7BQ2TAP0 167 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 TFB1MQ8WVM0 346 aaKnown RBP15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ELP3Q9H9T3 547 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 CYP3A43Q9HB55 503 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 NDUFS3O75489 264 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 GRK2P25098 689 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 PTK2BQ14289 1009 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 INTS5Q6P9B9 1019 aaKnown RBP15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ZNF720Q7Z2F6 126 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 KDELC2Q7Z4H8 507 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ZNF786Q8N393 782 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 HNRNPCL2B2RXH8 293 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ALDH1A1P00352 501 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 BGNP21810 368 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DGKDQ16760 1214 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 FAXCQ5TGI0 409 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 PCNX4Q63HM2 1172 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 LZICQ8WZA0 190 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 FOPNLQ96NB1 174 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 CBWD1Q9BRT8 395 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 PPLO60437 1756 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms