RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
CMTM1-214ENST00000530141 CDY2AQ9Y6F7 541 aa8.66□□□□□ -1.02
CMTM1-214ENST00000530141 TECTAO75443 2155 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 ZRANB2O95218 330 aaKnown RBP eCLIP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 FGGP02679 453 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 RRM1P23921 792 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 CHRNA3P32297 505 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 RAD23BP54727 409 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 VSNL1P62760 191 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 MAMLD1Q13495 774 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 CUL1Q13616 776 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 PIGHQ14442 188 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF268Q14587 947 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 ACAP1Q15027 740 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 ODF2Q5BJF6 829 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 LRRC38Q5VT99 294 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 C9orf57Q5W0N0 161 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 GDF6Q6KF10 455 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 EMBQ6PCB8 327 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 DCUN1D2Q6PH85 259 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 BLOC1S3Q6QNY0 202 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 LCLAT1Q6UWP7 414 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 CCNI2Q6ZMN8 369 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 MMS22LQ6ZRQ5 1243 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 EP400NLQ6ZTU2 488 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 FAM228AQ86W67 206 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 DNAAF5Q86Y56 855 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 RHOT1Q8IXI2 618 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 KRT222Q8N1A0 295 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 C1orf131Q8NDD1 294 aaKnown RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 SPATA18Q8TC71 538 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 FNIP1Q8TF40 1166 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 CD101Q93033 1021 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 PGBD4Q96DM1 585 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 RBM41Q96IZ5 413 aaKnown RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 FAM84AQ96KN4 292 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 PNKPQ96T60 521 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 KRT12Q99456 494 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 EIF2AQ9BY44 585 aaKnown RBP8.65□□□□□ -1.02
CMTM1-214ENST00000530141 FAM129AQ9BZQ8 928 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 SYNCQ9H7C4 482 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 ACP6Q9NPH0 428 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 GDAP2Q9NXN4 497 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 HESX1Q9UBX0 185 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 GIT1Q9Y2X7 761 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 IPPQ9Y573 584 aa8.65□□□□□ -1.02
CMTM1-214ENST00000530141 KAT6AQ92794 2004 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 PLXNA3P51805 1871 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 C5orf42Q9H799 3197 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SMIM28A0A1B0GU29 152 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 PIRO00625 290 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 DCXO43602 365 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ITGA4P13612 1032 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 LRPAP1P30533 357 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 GABRB2P47870 512 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 PEX5P50542 639 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 MGAT3Q09327 533 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 PTGISQ16647 500 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 HADHQ16836 314 aaKnown RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ZNF394Q53GI3 561 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 FAM26DQ5JW98 314 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 FBXO47Q5MNV8 452 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 BEND6Q5SZJ8 279 aaPredicted RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 UBXN11Q5T124 520 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SYDE1Q6ZW31 735 aaPredicted RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ZDHHC17Q8IUH5 632 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 TOP6BLQ8N6T0 577 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 NIPA2Q8N8Q9 360 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SLC4A11Q8NBS3 891 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 GRK7Q8WTQ7 553 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 TMEM40Q8WWA1 233 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ELMO3Q96BJ8 720 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 C18orf8Q96DM3 657 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 TNIP3Q96KP6 325 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SLC9A7Q96T83 725 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 LRRC1Q9BTT6 524 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 ELOVL4Q9GZR5 314 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SNX25Q9H3E2 840 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 NXF3Q9H4D5 531 aaKnown RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SMYD3Q9H7B4 428 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 GDF3Q9NR23 364 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 FAM114A2Q9NRY5 505 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 DDX56Q9NY93 547 aaKnown RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 FEZ2Q9UHY8 353 aaPredicted RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 MUTYHQ9UIF7 546 aa8.64□□□□□ -1.03
CMTM1-214ENST00000530141 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 UTP11Q9Y3A2 253 aaKnown RBP8.64□□□□□ -1.03
CMTM1-214ENST00000530141 SNX9Q9Y5X1 595 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms