RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 MAP3K13O43283 966 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 TOP3BO95985 862 aaKnown RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 CYP17A1P05093 508 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 GAP43P17677 238 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 GJB2P29033 226 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 EIF2DP41214 584 aaKnown RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 P2RY2P41231 377 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 DPP6P42658 865 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 GRIN1Q05586 938 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 KCNA1Q09470 495 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 MYO1EQ12965 1108 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 SOWAHAQ2M3V2 549 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 GAB4Q2WGN9 574 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 TMEM92Q6UXU6 159 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 DENND5BQ6ZUT9 1274 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 SYT12Q8IV01 421 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 PNKPQ96T60 521 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 POLMQ9NP87 494 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 CIZ1Q9ULV3 898 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 HCRTO43612 131 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 GARTP22102 1010 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ANXA13P27216 316 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 GRIK1P39086 918 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 PPP3CCP48454 512 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 SLC7A9P82251 487 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ZXDBP98169 803 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 BYSLQ13895 437 aaKnown RBP17.18■□□□□ 0.34
COL16A1-216ENST00000529928 SPDYCQ5MJ68 293 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 EOGTQ5NDL2 527 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ADGRG2Q8IZP9 1017 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ALLCQ8N6M5 410 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 IL17RCQ8NAC3 791 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 TXNDC5Q8NBS9 432 aaKnown RBP17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 ZCCHC14Q8WYQ9 949 aaKnown RBP17.18■□□□□ 0.34
COL16A1-216ENST00000529928 SYT15Q9BQS2 421 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 MTMR12Q9C0I1 747 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 CDH9Q9ULB4 789 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 NEUROG3Q9Y4Z2 214 aa17.18■□□□□ 0.34
COL16A1-216ENST00000529928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 ANTXRLA6NF34 631 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 SRRM3A6NNA2 597 aaPredicted RBP17.17■□□□□ 0.34
COL16A1-216ENST00000529928 ATP2C2O75185 946 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 GCNT3O95395 438 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 KLF8O95600 359 aaPredicted RBP17.17■□□□□ 0.34
COL16A1-216ENST00000529928 APODP05090 189 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 HNRNPLP14866 589 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL16A1-216ENST00000529928 BDNFP23560 247 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 PSMC1P62191 440 aaKnown RBP17.17■□□□□ 0.34
COL16A1-216ENST00000529928 DHCR24Q15392 516 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 SCARA3Q6AZY7 606 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 TMEFF1Q8IYR6 380 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 SYCP3Q8IZU3 236 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 RLN3Q8WXF3 142 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 MYLPFQ96A32 169 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 ANKRD36BP1Q96IX9 119 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 FNBP1Q96RU3 617 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 TTLL2Q9BWV7 592 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 OLFML3Q9NRN5 406 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL16A1-216ENST00000529928 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 SIX4Q9UIU6 781 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
COL16A1-216ENST00000529928 PTPRDP23468 1912 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 SGK1O00141 431 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 TRIM66O15016 1216 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 KAT7O95251 611 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 OLFM2O95897 454 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 ADH1CP00326 375 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 ENGP17813 658 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 HOXD12P35452 270 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 TIE1P35590 1138 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 PTGER3P43115 390 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 MAPK8P45983 427 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 USP46P62068 366 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 NOP14P78316 857 aaKnown RBP17.16■□□□□ 0.34
COL16A1-216ENST00000529928 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 RESTQ13127 1097 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 ALCAMQ13740 583 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 SF3A1Q15459 793 aaKnown RBP17.16■□□□□ 0.34
COL16A1-216ENST00000529928 LYSMD4Q5XG99 296 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 SLC23A3Q6PIS1 610 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 ARMCX6Q7L4S7 300 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 LIMS2Q7Z4I7 341 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 BRAPQ7Z569 592 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 KBTBD7Q8WVZ9 684 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 HPDLQ96IR7 371 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 CRTAC1Q9NQ79 661 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 TBC1D7Q9P0N9 293 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms