RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 DDX43Q9NXZ2 648 aaKnown RBP11.19□□□□□ -0.62
COPB1-207ENST00000529866 GCNT4Q9P109 453 aa11.19□□□□□ -0.62
COPB1-207ENST00000529866 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
COPB1-207ENST00000529866 CELSR3Q9NYQ7 3312 aa11.19□□□□□ -0.62
COPB1-207ENST00000529866 EML5Q05BV3 1969 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 LEFTY2O00292 366 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 HUS1O60921 280 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 KAT7O95251 611 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 ADH1CP00326 375 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 CAPNS1P04632 268 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 CYP17A1P05093 508 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 HNRNPLP14866 589 aaKnown RBP eCLIP11.18□□□□□ -0.62
COPB1-207ENST00000529866 PCSK1P29120 753 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 GRIA2P42262 883 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 ACOT2P49753 483 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 FAM193AP78312 1265 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
COPB1-207ENST00000529866 TRIP6Q15654 476 aaKnown RBP11.18□□□□□ -0.62
COPB1-207ENST00000529866 IL17AQ16552 155 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 PREPLQ4J6C6 727 aaPredicted RBP11.18□□□□□ -0.62
COPB1-207ENST00000529866 ZC2HC1CQ53FD0 456 aaPredicted RBP11.18□□□□□ -0.62
COPB1-207ENST00000529866 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 SLFN12LQ6IEE8 588 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 NT5DC4Q86YG4 428 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 PDCL2Q8N4E4 241 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 FSCN3Q9NQT6 498 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 ARHGEF4Q9NR80 690 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 DNAAF2Q9NVR5 837 aaKnown RBP11.18□□□□□ -0.62
COPB1-207ENST00000529866 EHD2Q9NZN4 543 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 TRPM5Q9NZQ8 1165 aa11.18□□□□□ -0.62
COPB1-207ENST00000529866 MAST4O15021 2626 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 TBCAO75347 108 aaKnown RBP11.17□□□□□ -0.62
COPB1-207ENST00000529866 IL18RAPO95256 599 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 FTH1P19P0C7X4 201 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 CD59P13987 128 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 LHX1P48742 406 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 DHCR24Q15392 516 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 CCNI2Q6ZMN8 369 aaPredicted RBP11.17□□□□□ -0.62
COPB1-207ENST00000529866 C4orf50Q6ZRC1 276 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
COPB1-207ENST00000529866 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 PNMA5Q96PV4 448 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 PLIN2Q99541 437 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 REEP2Q9BRK0 252 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 SUSD2Q9UGT4 822 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 AGO2Q9UKV8 859 aaKnown RBP11.17□□□□□ -0.62
COPB1-207ENST00000529866 APOBEC2Q9Y235 224 aaKnown RBP11.17□□□□□ -0.62
COPB1-207ENST00000529866 NUP205Q92621 2012 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 ASXL3Q9C0F0 2248 aa11.17□□□□□ -0.62
COPB1-207ENST00000529866 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 SH3BP5O60239 455 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 TRAK2O60296 914 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ZNF217O75362 1048 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 ADH5P11766 374 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 GNSP15586 552 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 ANXA13P27216 316 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 MAGEA11P43364 429 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 TNFRSF4P43489 277 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 KIR2DL1P43626 348 aaPredicted RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 PPP3CCP48454 512 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ZNF131P52739 623 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 SLC7A9P82251 487 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ATP2C1P98194 919 aaPredicted RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 KDSRQ06136 332 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 GAB4Q2WGN9 574 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 SLC39A4Q6P5W5 647 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 GPBP1Q86WP2 473 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 DDX42Q86XP3 938 aaKnown RBP eCLIP11.16□□□□□ -0.622e-15■■■■■ 26.8
COPB1-207ENST00000529866 NAXDQ8IW45 347 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 FRMD1Q8N878 549 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 ZHX3Q9H4I2 956 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 FAM124BQ9H5Z6 455 aaPredicted RBP11.16□□□□□ -0.62
COPB1-207ENST00000529866 CALCOCO1Q9P1Z2 691 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 CPQQ9Y646 472 aa11.16□□□□□ -0.62
COPB1-207ENST00000529866 TSC2P49815 1807 aa11.15□□□□□ -0.62
COPB1-207ENST00000529866 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
COPB1-207ENST00000529866 TBC1D3BA6NDS4 549 aa11.15□□□□□ -0.62
COPB1-207ENST00000529866 ANTXRLA6NF34 631 aa11.15□□□□□ -0.62
COPB1-207ENST00000529866 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
COPB1-207ENST00000529866 ADAM23O75077 832 aa11.15□□□□□ -0.62
COPB1-207ENST00000529866 SLC6A11P48066 632 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms